DRSC/TRiP Functional Genomics Resources

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Protein Alignment gsb-n and YOX1

DIOPT Version :10

Sequence 1:NP_523862.1 Gene:gsb-n / 38004 FlyBaseID:FBgn0001147 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_013685.1 Gene:YOX1 / 854981 SGDID:S000004489 Length:385 Species:Saccharomyces cerevisiae


Alignment Length:302 Identity:60/302 - (19%)
Similarity:108/302 - (35%) Gaps:108/302 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 SKPKVTSPEIETRIDELRKENPSIFSWEIREKLIKEGFADPPSTSSISRLLRGSDRGSED----- 149
            ::|:.....:...:..|. ||.|.:.    :.::|...:|...:|.::......|...|:     
Yeast    54 NRPRSVESALRHTVTSLH-ENSSAYG----DDMLKHTQSDSALSSQLNSSQETVDESHENLLLTP 113

  Fly   150 ---GRKDYTI----NGILGGRDSDISDTES---------------------------EPGI---P 177
               .::||::    |.||    :.:|..:|                           ||.|   |
Yeast   114 LNSKKRDYSVSSKKNDIL----TPLSAAKSIIIPSASKEKRRAFAFITHSQETFPKKEPKIDNAP 174

  Fly   178 LKRKQRRSRTTFTAEQLEALERAFSRTQYPDVYTREELAQTTALTEARIQVWFSNRRARLRKHSG 242
            |.|::|| ||  ::::|..|:..|.:...|....|.|||::..:||..:|:||.|:|..:::...
Yeast   175 LARRKRR-RT--SSQELSILQAEFEKCPAPSKEKRIELAESCHMTEKAVQIWFQNKRQAVKRQRI 236

  Fly   243 GSNSG------LSP--------------------MNSGSSNVGVGVGLSGATAPLGYGPLGVGSM 281
            .::..      :||                    :..|||     ...|.:::||...|      
Yeast   237 ATSKSTTIIQTVSPPSPPLDVHATPLASRVKADILRDGSS-----CSRSSSSSPLENTP------ 290

  Fly   282 AGYSPAPGTTATGAGMNDGVHHAAHAPSSHHSAATAAAAAHH 323
                |.|             ||:.:..||..|...:.|...|
Yeast   291 ----PRP-------------HHSLNRRSSTPSIKRSQALTFH 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gsb-nNP_523862.1 HTH_CRP 20..141 CDD:481199 8/50 (16%)
Homeodomain 183..239 CDD:459649 19/55 (35%)
YOX1NP_013685.1 COG5576 126..267 CDD:227863 32/147 (22%)

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