DRSC/TRiP Functional Genomics Resources

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Protein Alignment gsb-n and RAX2

DIOPT Version :10

Sequence 1:NP_523862.1 Gene:gsb-n / 38004 FlyBaseID:FBgn0001147 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_116142.1 Gene:RAX2 / 84839 HGNCID:18286 Length:184 Species:Homo sapiens


Alignment Length:167 Identity:65/167 - (38%)
Similarity:76/167 - (45%) Gaps:34/167 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   179 KRKQRRSRTTFTAEQLEALERAFSRTQYPDVYTREELAQTTALTEARIQVWFSNRRARLRKHSGG 243
            |:|.||:|||||..||..|||||..:.|||||:|||||....|.|.|:||||.||||:.|:.   
Human    24 KKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWRRQ--- 85

  Fly   244 SNSGLSPMNSGSSNVGV-----GVGLSGATAP---------LGYGPLGV-GSMAGYSPAPGTTAT 293
                 ..:.|||..|..     ...|..|..|         ||.||..| |......|.||..| 
Human    86 -----ERLESGSGAVAAPRLPEAPALPFARPPAMSLPLEPWLGPGPPAVPGLPRLLGPGPGLQA- 144

  Fly   294 GAGMNDGVHHAAHAPSSHHSAATAAAA----AHHHTQ 326
                :.|.|  |.||:.....|...|:    |..|.|
Human   145 ----SFGPH--AFAPTFADGFALEEASLRLLAKEHAQ 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gsb-nNP_523862.1 HTH_CRP 20..141 CDD:481199
Homeodomain 183..239 CDD:459649 35/55 (64%)
RAX2NP_116142.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..33 5/8 (63%)
Homeodomain 28..84 CDD:459649 35/55 (64%)
Blue background indicates that the domain is not in the aligned region.

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