Protein Alignment gsb-n and crx

DIOPT Version :10

• Sequence 1: NP_523862.1
• Gene: gsb-n / 38004
• FlyBaseID: FBgn0001147
• Length: 449
• Species: Drosophila melanogaster
• Sequence 2: NP_694419.1
• Gene: crx / 81881
• ZFINID: ZDB-GENE-010403-1
• Length: 281
• Species: Danio rerio
• Alignment Length: 278
• Identity: 83/278 - (29%)
• Similarity: 117/278 - (42%)
• Gaps: 54/278 - (19%)

  Fly   154 YTINGI-LGGRDSDISDTE-SEPGIPLKRKQRRSRTTFTAEQLEALERAFSRTQYPDVYTREELA 216
            |.:||: |.....|:..|. ..|..|  |||||.|||||..||:.||..|::|:|||::.|||:|
Zfish    10 YAVNGLTLSASGMDLLHTAVGYPATP--RKQRRERTTFTRTQLDILEALFTKTRYPDIFMREEVA 72

  Fly   217 QTTALTEARIQVWFSNRRARLR---KHSGGSNSGLSPMNSGS------SNVGVGVGLSGATAP-- 270
            ....|.|:|:||||.||||:.|   :.:.|......|....|      |:.|....:..|..|
Zfish    73 LKINLPESRVQVWFKNRRAKCRQQQQQTSGQPKPRPPKKKSSPPPDLTSDPGTSSSVVAAPTPTV 137

  Fly   271 -----LGYGPLGVGSMAGYSPAPGTTATGAGMNDGVHHAAHAPSSHHSAATAAAAAHHHTQMGGY 330
                 .|..|:.|.|....||.|.... |:| ...|...|..|.|
Zfish   138 PPSVSAGTAPVSVWSPTSLSPLPDPLC-GSG-TPCVQRPAPYPMS-------------------- 180

  Fly   331 DLVQSAAQHGFPGGFAQPGHFGSQNYYH-QDYSKLTIDDFSKLTADSVSKISPSLHLSDNYSKLE 394
                    :|.|..::|  .:||..|:. .|.|.......::|:| |...:||....|...|..:
Zfish   181 --------YGQPSSYSQ--GYGSSPYFSGLDCSPYLSPMTTQLSA-SGGALSPLTVPSMGGSLSQ 234

  Fly   395 APSNWSQAAYHAAANYNA 412
            :||..||....|:..:::
Zfish   235 SPSLSSQGYSTASLGFSS 252

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
gsb-n	NP_523862.1	HTH_CRP	20..141	CDD:481199
		Homeodomain	183..239	CDD:459649	32/58 (55%)
crx	NP_694419.1	homeodomain	38..97		33/58 (57%)
		Homeodomain	49..94	CDD:459649	24/44 (55%)
		TF_Otx	152..230	CDD:427350	24/110 (22%)