DRSC/TRiP Functional Genomics Resources

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Protein Alignment gsb-n and Rhox13

DIOPT Version :10

Sequence 1:NP_523862.1 Gene:gsb-n / 38004 FlyBaseID:FBgn0001147 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_001171931.1 Gene:Rhox13 / 73614 MGIID:1920864 Length:232 Species:Mus musculus


Alignment Length:150 Identity:44/150 - (29%)
Similarity:62/150 - (41%) Gaps:40/150 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 IKEGFADPPSTSSISRLLRGSDRGSEDGRKDYTINGILGGRDSDISDTE--------------SE 173
            :||..:|..|.|........||...|......|       .|.|.||.|              :.
Mouse    63 VKESESDSESESDSESESDSSDSSDESDDDSST-------SDEDTSDPEEAAAPSVAAVAAAAAP 120

  Fly   174 PGIP-------------------LKRKQRRSRTTFTAEQLEALERAFSRTQYPDVYTREELAQTT 219
            |.:|                   ::|::|.....|...|:|.:|..|..|||||:.||.|||:|.
Mouse   121 PTVPAAAAIQIPGPYRYRPPRRHVRRRRRGPPFHFAQWQVEEMESLFEETQYPDLLTRGELARTL 185

  Fly   220 ALTEARIQVWFSNRRARLRK 239
            .:.|.:::|||:||||:.||
Mouse   186 NVPEVKVKVWFTNRRAKQRK 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gsb-nNP_523862.1 HTH_CRP 20..141 CDD:481199 5/17 (29%)
Homeodomain 183..239 CDD:459649 25/55 (45%)
Rhox13NP_001171931.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 45..114 14/57 (25%)
Homeodomain 155..205 CDD:459649 24/49 (49%)

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