DRSC/TRiP Functional Genomics Resources

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Protein Alignment gsb-n and RHOXF2B

DIOPT Version :10

Sequence 1:NP_523862.1 Gene:gsb-n / 38004 FlyBaseID:FBgn0001147 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_001093155.1 Gene:RHOXF2B / 727940 HGNCID:33519 Length:288 Species:Homo sapiens


Alignment Length:216 Identity:63/216 - (29%)
Similarity:95/216 - (43%) Gaps:48/216 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 SPEIETRIDELRKENPSIFSW--EIREKLIKEGFADP---PSTSSISRLLRGSDRGSE--DG--- 150
            ||.::.. .||:..|..:.|.  |::|   :|..|.|   ..|::..:|.....:|.|  ||   
Human    16 SPAVDDE-KELQDMNAMVLSLTEEVKE---EEEDAQPEPEQGTAAGEKLKSAGAQGGEEKDGGGE 76

  Fly   151 RKDYTINGILG-----------GRDSDISD---TESEPGIPLKR------------KQRRSRTTF 189
            .||....|:.|           |.|.::.|   :|.|||....|            .|:.:...|
Human    77 EKDGGGAGVPGHLWEGNLEGTSGSDGNVEDSDQSEKEPGQQYSRPQGAVGGLEPGNAQQPNVHAF 141

  Fly   190 TAEQLEALERAFSRTQYPDVYTREELAQTTALTEARIQVWFSNRRARLRKHSGGSNS-GLSPMNS 253
            |..||:.||..|.|.|:|..:.|..||::..:||..:|:||.||||:.|:|.....: .:.|..:
Human   142 TPLQLQELECIFQREQFPSEFLRRRLARSMNVTELAVQIWFENRRAKWRRHQRALMARNMLPFMA 206

  Fly   254 GSSNVGVGVGLSGA---TAPL 271
                ||..|.::.|   ||||
Human   207 ----VGQPVMVTAAEAITAPL 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gsb-nNP_523862.1 HTH_CRP 20..141 CDD:481199 13/49 (27%)
Homeodomain 183..239 CDD:459649 22/55 (40%)
RHOXF2BNP_001093155.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 16..136 30/123 (24%)
Homeodomain 139..191 CDD:459649 22/51 (43%)
PRK02287 <183..>232 CDD:235024 15/45 (33%)
Nuclear localization signal. /evidence=ECO:0000250 186..195 4/8 (50%)

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