Protein Alignment gsb-n and Isx

DIOPT Version :10

• Sequence 1: NP_523862.1
• Gene: gsb-n / 38004
• FlyBaseID: FBgn0001147
• Length: 449
• Species: Drosophila melanogaster
• Sequence 2: NP_001387929.1
• Gene: Isx / 682968
• RGDID: 1592776
• Length: 242
• Species: Rattus norvegicus
• Alignment Length: 206
• Identity: 64/206 - (31%)
• Similarity: 94/206 - (45%)
• Gaps: 30/206 - (14%)

  Fly   126 GFADPPS----TSSISRLLRGSDRGSEDGRKDYTINGILGGRDSDIS---------DTESEPGIP 177
            |:.:.|.    :.||..:|:   |.:|  |::......:||.||..:         .|:.:|...
  Rat    15 GYCEAPEKLGLSFSIEAILK---RPTE--RRNLPRPQSIGGGDSRQTTTSGSKLEKPTQDQPQEE 74

  Fly   178 LKRKQRRSRTTFTAEQLEALERAFSRTQYPDVYTREELAQTTALTEARIQVWFSNRRARLRKH-- 240
            .|.| ||.|||||.|||:.||:.|..|.|||::.|.:||....|.|||:|:||.|:||:.||.
  Rat    75 RKNK-RRVRTTFTTEQLQELEKLFHFTHYPDIHVRSQLASRINLPEARVQIWFQNQRAKWRKQEK 138

  Fly   241 SGGSNSGLSPMNSGSSNVGVGVGLSGATAPLGYGPLGVGSMAGYSPAPGTTATGAGMNDGV---- 301
            ||..::...|.:...::....:|.:....|    ||...:.....|.|.:....|.|....
  Rat   139 SGSLSAPQQPGSCTDAHCSAHIGATHRMLP----PLSDSARFKLVPCPDSPCPMAPMGPAAPAWP 199

  Fly   302 -HHAAHAPSSH 311
             |.||..|..|
  Rat   200 SHPAALCPYLH 210

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
gsb-n	NP_523862.1	HTH_CRP	20..141	CDD:481199	4/18 (22%)
		Homeodomain	183..239	CDD:459649	30/55 (55%)
Isx	NP_001387929.1	Homeodomain	79..135	CDD:459649	30/55 (55%)