Protein Alignment gsb-n and shox

DIOPT Version :10

• Sequence 1: NP_523862.1
• Gene: gsb-n / 38004
• FlyBaseID: FBgn0001147
• Length: 449
• Species: Drosophila melanogaster
• Sequence 2: XP_005167911.1
• Gene: shox / 664748
• ZFINID: ZDB-GENE-051030-21
• Length: 304
• Species: Danio rerio
• Alignment Length: 312
• Identity: 92/312 - (29%)
• Similarity: 123/312 - (39%)
• Gaps: 89/312 - (28%)

  Fly    78 ETGSIRPGVIGGSKPKVTSPEIETRIDELRKENPS---IFSWEIREKLIKEGFADPPSTSSISRL 139
            |:|..|...:|.|         ||.:.|:.:.|.:   :..::...:|.||...:...|
Zfish    31 ESGLARARELGNS---------ETNLQEITETNNNHCPVHLYKEHVELEKEKLKEFSVT------ 80

  Fly   140 LRGSDRGSEDGRKDYTINGILGGRD------SDISDTESEPGIPLKRKQRRSRTTFTAEQLEALE 198
             |.||             ||...:|      |:..|.:|      |.|||||||.||.|||..||
Zfish    81 -RASD-------------GIYDCKDKKEDVKSEDEDAQS------KLKQRRSRTNFTLEQLNELE 125

  Fly   199 RAFSRTQYPDVYTREELAQTTALTEARIQVWFSNRRARLRKHSGGSNSGLSPMNSGSSNVGVGVG 263
            |.|..|.|||.:.||||:|...|:|||:||||.||||:.||.....:.|:.        :|....
Zfish   126 RLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVI--------LGTASH 182

  Fly   264 LSGA-TAPLGYGPLGVGSMAGYSPAPGTTATGAGMNDGVH---H-AAHAP--------------- 308
            |... .||  |..:|...|............|.|.:...|   | |||||
Zfish   183 LDACRVAP--YVNMGALRMPFQQVQAQLQLEGVGTHSHPHLHPHLAAHAPYLMFPPPPFGLPIAS 245

  Fly   309 --SSHHSAATAAAAAHHHTQ-------------MGGYDLVQSAAQHGFPGGF 345
              .|..:||...|||..:::             :||:.|....||...||.:
Zfish   246 LADSASAAAAVVAAAKSNSKNSSIADLRLKAGLLGGHWLSPFQAQITAPGPY 297

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
gsb-n	NP_523862.1	HTH_CRP	20..141	CDD:481199	13/65 (20%)
		Homeodomain	183..239	CDD:459649	35/55 (64%)
shox	XP_005167911.1	SCP-1	<1..>145	CDD:114219	47/148 (32%)
		Homeodomain	110..166	CDD:459649	35/55 (64%)