DRSC/TRiP Functional Genomics Resources

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Protein Alignment gsb-n and SHOX

DIOPT Version :10

Sequence 1:NP_523862.1 Gene:gsb-n / 38004 FlyBaseID:FBgn0001147 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_000442.1 Gene:SHOX / 6473 HGNCID:10853 Length:292 Species:Homo sapiens


Alignment Length:309 Identity:93/309 - (30%)
Similarity:126/309 - (40%) Gaps:68/309 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 VSKILNRYQETGSIRPGVIGGSKPKVTSPEI----ETRIDELRKENPSIFSWEIREKLIKEGFAD 129
            |||..::..:.|:...|..||.|..:|..|:    ..|..||...:.|:       :.|.||...
Human     8 VSKSFDQKSKDGNGGGGGGGGKKDSITYREVLESGLARSRELGTSDSSL-------QDITEGGGH 65

  Fly   130 PPSTSSISRLLRGSDRGSEDGRKDYTINGILGG------RDSDISDTESEPGIPLKRKQRRSRTT 188
            .|     ..|.:......::..|::....:..|      :..|:. :|.|.| ..|.|||||||.
Human    66 CP-----VHLFKDHVDNDKEKLKEFGTARVAEGIYECKEKREDVK-SEDEDG-QTKLKQRRSRTN 123

  Fly   189 FTAEQLEALERAFSRTQYPDVYTREELAQTTALTEARIQVWFSNRRARLRKHSGGSNSGLSPMNS 253
            ||.|||..|||.|..|.|||.:.||||:|...|:|||:||||.||||:.||.....:.|:.    
Human   124 FTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVI---- 184

  Fly   254 GSSNVGVGVGLSGA-TAPLGYGPLGVGSMAGYSPAPGTTATGAGMNDGVHH---------AAHAP 308
                :|....|... .||  |..:|...|      |..........:||.|         |||||
Human   185 ----LGTANHLDACRVAP--YVNMGALRM------PFQQVQAQLQLEGVAHAHPHLHPHLAAHAP 237

  Fly   309 -----------------SSHHSAATAAAAAHHHTQMGGY-DLVQSAAQH 339
                             .|..:||..||||..:::.... ||...|.:|
Human   238 YLMFPPPPFGLPIASLAESASAAAVVAAAAKSNSKNSSIADLRLKARKH 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gsb-nNP_523862.1 HTH_CRP 20..141 CDD:481199 19/75 (25%)
Homeodomain 183..239 CDD:459649 35/55 (64%)
SHOXNP_000442.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..34 8/25 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 100..119 7/20 (35%)
Homeodomain 118..174 CDD:459649 35/55 (64%)
SH3-binding. /evidence=ECO:0000255 242..249 0/6 (0%)
OAR 272..288 CDD:461067 4/15 (27%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 274..287 4/13 (31%)

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