Protein Alignment gsb-n and pax6b

DIOPT Version :10

• Sequence 1: NP_523862.1
• Gene: gsb-n / 38004
• FlyBaseID: FBgn0001147
• Length: 449
• Species: Drosophila melanogaster
• Sequence 2: XP_005168876.1
• Gene: pax6b / 60639
• ZFINID: ZDB-GENE-001031-1
• Length: 450
• Species: Danio rerio
• Alignment Length: 342
• Identity: 146/342 - (42%)
• Similarity: 182/342 - (53%)
• Gaps: 76/342 - (22%)

  Fly    24 VNQLGGVFINGRPLPNHIRLKIVEMAASGVRPCVISRQLR-------------VSHGCVSKILNR 75
            ||||||||:||||||:..|.||||:|.||.|||.|||.|:             ||:|||||||.|
Zfish    27 VNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHDDAKVQLDNKNVSNGCVSKILGR 91

  Fly    76 YQETGSIRPGVIGGSKPKVTSPEIETRIDELRKENPSIFSWEIREKLIKEGFA---DPPSTSSIS 137
            |.|||||||..||||||:|.:||:..:|.:.::|.||||:||||::|:.||..   :.||.|||:
Zfish    92 YYETGSIRPRAIGGSKPRVATPEVVGKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSIN 156

  Fly   138 RLLRG----SDRGSEDGRKD--YTINGILG----------------------------------- 161
            |:||.    ..:...||..|  ..:||..|
Zfish   157 RVLRNLASEKQQMGADGMYDKLRMLNGQSGTWGTRPGWYPGTSVPGQPNQDGCQQQDNGGENTNS 221

  Fly   162 ----GRDSDISDTESEPGIPLKRKQRRSRTTFTAEQLEALERAFSRTQYPDVYTREELAQTTALT 222
                |.|||    |::..:.||||.:|:||:||.||:||||:.|.||.||||:.||.||....|.
Zfish   222 ISSNGEDSD----ETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLP 282

  Fly   223 EARIQVWFSNRRARLRKHS-------GGSNSGLSPMNSGSSNVGVGVGLSGATAPLGYGPLGVGS 280
            |||||||||||||:.|:..       ..|||......|.|.|..|...:...|.|:.:   ..||
Zfish   283 EARIQVWFSNRRAKWRREEKLRNQRRQASNSSSHIPISSSFNTSVYQAIPQPTTPVSF---TTGS 344

  Fly   281 MAGYSPAPGTTATGAGM 297
            |.| .|....|.|..|:
Zfish   345 MLG-RPDTALTNTYTGL 360

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
gsb-n	NP_523862.1	HTH_CRP	20..141	CDD:481199	75/132 (57%)
		Homeodomain	183..239	CDD:459649	36/55 (65%)
pax6b	XP_005168876.1	PAX	23..160	CDD:128645	75/132 (57%)
		Homeodomain	244..299	CDD:459649	36/54 (67%)