DRSC/TRiP Functional Genomics Resources

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Protein Alignment gsb-n and mxtx2

DIOPT Version :10

Sequence 1:NP_523862.1 Gene:gsb-n / 38004 FlyBaseID:FBgn0001147 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_001073284.1 Gene:mxtx2 / 58078 ZFINID:ZDB-GENE-000710-6 Length:296 Species:Danio rerio


Alignment Length:221 Identity:61/221 - (27%)
Similarity:81/221 - (36%) Gaps:71/221 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 RRSRTTFTAEQLEALERAFSRTQYPDVYTREELAQTTALTEARIQVWFSNRRARLRKHSGGSNSG 247
            ||.||:||.|.||.|:.||:...||.:..||.|:|.|.|.|:||||||.|:|||..|:....:  
Zfish    23 RRKRTSFTKEHLELLKMAFNVDPYPGISVRESLSQATGLPESRIQVWFQNKRARTLKNRAIQS-- 85

  Fly   248 LSPMNSGSSNVGVGVGLSGATAPLGYGPLGVGSMAGYSPAPGTTATGAGMNDGVHHAAHAPSSHH 312
             ||.....|                  ||         |:|                 ..|.  |
Zfish    86 -SPQLDNKS------------------PL---------PSP-----------------FLPP--H 103

  Fly   313 SAATAAAAAHHHTQMGGYDLVQSAAQHGFPGGFAQPGHFGSQNYYHQDYSKLTIDDFSKLTADSV 377
            .|:...:|.....|...:::..|.         ..|.||   .:...|||...:.. .:......
Zfish   104 MASVGVSAQQRGIQESPFNIQMSQ---------TSPQHF---TFPPSDYSTPVVKP-RQTRLMGT 155

  Fly   378 SKISPSLHLSDNYSKLEA-PSNWSQA 402
            |..||        |.|:| |.:||.|
Zfish   156 SSCSP--------SDLQATPDSWSYA 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gsb-nNP_523862.1 HTH_CRP 20..141 CDD:481199
Homeodomain 183..239 CDD:459649 31/55 (56%)
mxtx2NP_001073284.1 Homeodomain 23..76 CDD:459649 29/52 (56%)
Blue background indicates that the domain is not in the aligned region.

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