DRSC/TRiP Functional Genomics Resources

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Protein Alignment gsb-n and LOC5666764

DIOPT Version :10

Sequence 1:NP_523862.1 Gene:gsb-n / 38004 FlyBaseID:FBgn0001147 Length:449 Species:Drosophila melanogaster
Sequence 2:XP_061505688.1 Gene:LOC5666764 / 5666764 VectorBaseID:AGAMI1_014787 Length:591 Species:Anopheles gambiae


Alignment Length:293 Identity:94/293 - (32%)
Similarity:121/293 - (41%) Gaps:81/293 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 LKRKQRRSRTTFTAEQLEALERAFSRTQYPDVYTREELAQTTALTEARIQVWFSNRRARLRKH-- 240
            :||||||.||||.:.||:.|||||.||.||||:.|||||....|||||:||||.||||:.||.  
Mosquito     1 MKRKQRRYRTTFNSLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWRKSEK 65

  Fly   241 -SGGSNSGLSPMNSGSSNVGVGVGLSGATAPL--GYGPLG-----VGSMAGYSPAPGTTA----- 292
             :||...|..|...|...:....| :..|.|.  |.|..|     ||.:...:.|.|::.     
Mosquito    66 TTGGGPGGGDPDQDGQDVLSTSTG-AATTCPRADGTGDTGLLGAEVGLLVDAADATGSSRMLNDD 129

  Fly   293 ---TGAGMNDGVHH--AAHAPSSHHSAATAAAAA------------------HHHTQ-------- 326
               .|.|::|.|.|  .....|.|||.|.|:...                  |||.|        
Mosquito   130 EDDDGLGLSDEVLHGMGGGLKSQHHSQAVASLGGLGKSLNDAMSGEQAGHHLHHHLQQQQQQQHQ 194

  Fly   327 -----------MGGYDLV------------QSAAQHGFPGGFAQ----PGHFGSQNY--YHQDYS 362
                       :...|:|            ...:.||...|.|.    ||...|..|  ...:..
Mosquito   195 HHVGPGARTSLLDTVDVVLPGSSSSSGLTFDGGSLHGMTLGLADDPTGPGVVSSSGYSVVDAELP 259

  Fly   363 KLTIDDFSKLTADSVSKISPSLHLSDNYSKLEA 395
            :|||...|     |..::||:|.|:.|:..|.:
Mosquito   260 RLTIGSLS-----SPGRLSPNLFLNLNFDHLNS 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gsb-nNP_523862.1 HTH_CRP 20..141 CDD:481199
Homeodomain 183..239 CDD:459649 37/55 (67%)
LOC5666764XP_061505688.1 None
Blue background indicates that the domain is not in the aligned region.

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