DRSC/TRiP Functional Genomics Resources

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Protein Alignment gsb-n and PAX9

DIOPT Version :10

Sequence 1:NP_523862.1 Gene:gsb-n / 38004 FlyBaseID:FBgn0001147 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_006185.1 Gene:PAX9 / 5083 HGNCID:8623 Length:341 Species:Homo sapiens


Alignment Length:342 Identity:120/342 - (35%)
Similarity:168/342 - (49%) Gaps:57/342 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LRPLFAGYPFQGQGRVNQLGGVFINGRPLPNHIRLKIVEMAASGVRPCVISRQLRVSHGCVSKIL 73
            :.|.|        |.||||||||:|||||||.|||:|||:|..|:|||.||||||||||||||||
Human     1 MEPAF--------GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKIL 57

  Fly    74 NRYQETGSIRPGVIGGSKPKVTSPEIETRIDELRKENPSIFSWEIREKLIKEGFADP---PSTSS 135
            .||.|||||.||.||||||:||:|.:...|...::.:|.||:||||::|:.:|..|.   ||.||
Human    58 ARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVPSVSS 122

  Fly   136 ISRLLRG-----SDRGSEDGRKDY--------TINGILGGRDSDISDTESE----PGIP-LKRKQ 182
            |||:||.     :.:|..|..|.:        ..|.|. ...|.|:...::    ||:| :....
Human   123 ISRILRNKIGNLAQQGHYDSYKQHQPTPQPALPYNHIY-SYPSPITAAAAKVPTPPGVPAIPGSV 186

  Fly   183 RRSRTTFTAEQLEALERAFSRTQYPDVYTREELAQTTALTEARIQVWFSNRRARLRKHSGGSNSG 247
            ...||..::..:..:....|.|        ::::.::.....:::.|.|..|...          
Human   187 AMPRTWPSSHSVTDILGIRSIT--------DQVSDSSPYHSPKVEEWSSLGRNNF---------- 233

  Fly   248 LSPMNSGSSNVGVGVGLSGATAPLGYGPLGVGSMAGYSPAPGTTATGAGMNDGVHHAAHAPSSHH 312
              |..:..:..|:..|.....|..|..|.|:       ||.|:..:.:.|......|..:|...:
Human   234 --PAAAPHAVNGLEKGALEQEAKYGQAPNGL-------PAVGSFVSASSMAPYPTPAQVSPYMTY 289

  Fly   313 SAATAAAAAHHHTQMGG 329
            |||.:...|.|..|..|
Human   290 SAAPSGYVAGHGWQHAG 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gsb-nNP_523862.1 HTH_CRP 20..141 CDD:481199 79/123 (64%)
Homeodomain 183..239 CDD:459649 7/55 (13%)
PAX9NP_006185.1 PAX 6..131 CDD:238076 81/124 (65%)
PAI subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 7..63 44/55 (80%)
RED subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 82..130 20/47 (43%)
Interaction with KDM5B. /evidence=ECO:0000269|PubMed:12657635 168..189 3/20 (15%)

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