DRSC/TRiP Functional Genomics Resources

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Protein Alignment gsb-n and PAX4

DIOPT Version :10

Sequence 1:NP_523862.1 Gene:gsb-n / 38004 FlyBaseID:FBgn0001147 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_001353039.1 Gene:PAX4 / 5078 HGNCID:8618 Length:351 Species:Homo sapiens


Alignment Length:276 Identity:112/276 - (40%)
Similarity:153/276 - (55%) Gaps:28/276 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 GQGRVNQLGGVFINGRPLPNHIRLKIVEMAASGVRPCVISRQLRVSHGCVSKILNRYQETGSIRP 84
            |...:|||||:|:||||||...|.:||.:|.||:|||.|||.|:||:|||||||.||..||.:.|
Human     5 GISSMNQLGGLFVNGRPLPLDTRQQIVRLAVSGMRPCDISRILKVSNGCVSKILGRYYRTGVLEP 69

  Fly    85 GVIGGSKPKVTSPEIETRIDELRKENPSIFSWEIREKLIKEGFA---DPPSTSSISRLLRG--SD 144
            ..||||||::.:|.:..||.:|:.|.|::|:|||:.:|..||..   ..||.|||:|:||.  .|
Human    70 KGIGGSKPRLATPPVVARIAQLKGECPALFAWEIQRQLCAEGLCTQDKTPSVSSINRVLRALQED 134

  Fly   145 RGSEDGR---KDYTINGILGGRDSDISDTESEPGIPLKRKQRRSRTTFTAEQLEALERAFSRTQY 206
            :|....|   .......:|.......:...:.||     ...|:||.|:..|.||||:.|.|.||
Human   135 QGLPCTRLRSPAVLAPAVLTPHSGSETPRGTHPG-----TGHRNRTIFSPSQAEALEKEFQRGQY 194

  Fly   207 PDVYTREELAQTTALTEARIQVWFSNRRARLRKHS--------GGSNSGLSP-------MNSGSS 256
            ||...|.:||..|:|.|..::||||||||:.|:..        .|::.||:.       :::..|
Human   195 PDSVARGKLATATSLPEDTVRVWFSNRRAKWRRQEKLKWEMQLPGASQGLTVPRVAPGIISAQQS 259

  Fly   257 NVGVGVGLSGATAPLG 272
            ...|......|..|||
Human   260 PGSVPTAALPALEPLG 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gsb-nNP_523862.1 HTH_CRP 20..141 CDD:481199 65/123 (53%)
Homeodomain 183..239 CDD:459649 29/55 (53%)
PAX4NP_001353039.1 PAX 5..129 CDD:128645 65/123 (53%)
Homeodomain 172..227 CDD:459649 29/54 (54%)

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