DRSC/TRiP Functional Genomics Resources

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Protein Alignment gsb-n and PAX1

DIOPT Version :10

Sequence 1:NP_523862.1 Gene:gsb-n / 38004 FlyBaseID:FBgn0001147 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_006183.2 Gene:PAX1 / 5075 HGNCID:8615 Length:534 Species:Homo sapiens


Alignment Length:512 Identity:159/512 - (31%)
Similarity:212/512 - (41%) Gaps:165/512 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 QGQGRVNQLGGVFINGRPLPNHIRLKIVEMAASGVRPCVISRQLRVSHGCVSKILNRYQETGSIR 83
            |..|.||||||||:|||||||.|||:|||:|..|:|||.||||||||||||||||.||.|||||.
Human    97 QTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILARYNETGSIL 161

  Fly    84 PGVIGGSKPKVTSPEIETRIDELRKENPSIFSWEIREKLIKEGFADP---PSTSSISRLLRGSDR 145
            ||.||||||:||:|.:...|.:.::.:|.||:||||::|:.:|..|.   ||.|||||:||..  
Human   162 PGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVPSVSSISRILRNK-- 224

  Fly   146 GSEDGRKDYTINGILGGRDSDISDTESEPGIPLKRKQRRSRTTFTAEQLEALERAFSRTQYPDVY 210
                          :|        :.::||.....||..|:.|.....:         .|||   
Human   225 --------------IG--------SLAQPGPYEASKQPPSQPTLPYNHI---------YQYP--- 255

  Fly   211 TREELAQTTALTEARIQVWFSNRRARLRKHSGGSNSGLSPMNSGSSNVGVGVGLSGATAPLGYGP 275
                .....:.|.|::                ||:.|: |..:|.    |.:..|..:|......
Human   256 ----YPSPVSPTGAKM----------------GSHPGV-PGTAGH----VSIPRSWPSAHSVSNI 295

  Fly   276 LGV-------GSMAG-----YSPAPGTTATGAGMND--GVHHAAH--APSSHHSAATAAAAAHHH 324
            ||:       |::||     |||.         |.|  ||:..|.  .|:.:.....|..|...:
Human   296 LGIRTFMEQTGALAGSEGTAYSPK---------MEDWAGVNRTAFPATPAVNGLEKPALEADIKY 351

  Fly   325 TQ-------MGGY---DLVQSAAQHGF---PGG----------------FAQPG-----HFG--- 352
            ||       :||:   ....::.|||.   |||                .|.||     |.|   
Human   352 TQSASTLSAVGGFLPACAYPASNQHGVYSAPGGGYLAPGPPWPPAQGPPLAPPGAGVAVHGGELA 416

  Fly   353 -SQNYYHQDYSKLTIDDFSKLTADSVSKISPSLHLSDNYSKLEAP---SNWSQAAYHAAANYNAH 413
             :..:.|....       ..|.|.:....:||:..:|..|:...|   |..::|.....|:..|.
Human   417 AAMTFKHPSRE-------GSLPAPAARPRTPSVAYTDCPSRPRPPRGSSPRTRARRERQADPGAQ 474

  Fly   414 VAQHQLNDYAAAAAHG-------------------NPASAYSHPL--PTQGQAKYWS 449
            |.       |||.|.|                   .|||..:.|.  |......|||
Human   475 VC-------AAAPAIGTGRIGGLAEEEASAGPRGARPASPQAQPCLWPDPPHFLYWS 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gsb-nNP_523862.1 HTH_CRP 20..141 CDD:481199 79/123 (64%)
Homeodomain 183..239 CDD:459649 7/55 (13%)
PAX1NP_006183.2 PAX 98..225 CDD:238076 81/142 (57%)
PAI subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 101..157 44/55 (80%)
RED subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 176..224 20/47 (43%)
PHA03247 <212..517 CDD:223021 83/388 (21%)
PRK07003 <402..>518 CDD:235906 28/129 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 424..480 14/69 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 492..511 3/18 (17%)

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