Protein Alignment gsb-n and Nobox

DIOPT Version :10

• Sequence 1: NP_523862.1
• Gene: gsb-n / 38004
• FlyBaseID: FBgn0001147
• Length: 449
• Species: Drosophila melanogaster
• Sequence 2: NP_001178942.1
• Gene: Nobox / 502759
• RGDID: 1563929
• Length: 524
• Species: Rattus norvegicus
• Alignment Length: 286
• Identity: 66/286 - (23%)
• Similarity: 104/286 - (36%)
• Gaps: 76/286 - (26%)

  Fly    42 RLKIVEMAASGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPKVTSPEIETRIDEL 106
            :|..:..|..|.||.     .:.|..|:.....|.....|          |.|.||:.:.:...|
  Rat    44 KLSSLPRAGLGKRPL-----SKTSGDCIDADTCRVHTAPS----------PAVCSPKPQKKGSSL 93

  Fly   107 RKENPSIFSWEIREKLIKEGFADPPSTSSISRLLRGSDRGSEDGRKDYTINGILGGRDSDISDTE 171
            :         |.:.:.:|...:..|.                      .:...|..|:.|:   :
  Rat    94 Q---------EKKAETVKPSMSAGPG----------------------QVPNPLNFRERDL---K 124

  Fly   172 SEPGIPLKRKQRRSRTTFTAEQLEALERAFSRTQYPDVYTREELAQTTALTEARIQVWFSNRRAR 236
            .||.....:.::::||.:.::|||.|||.|....|||...|.|:||...:|..||.|||.||||:
  Rat   125 KEPLEATCQFRKKTRTLYRSDQLEELERIFQEDHYPDSDKRHEIAQMVGVTPQRIMVWFQNRRAK 189

  Fly   237 LRK----HSGGSNSGLSPMNSGSSNVGVGVGLSGATAPLGYGPLGV----------GSMAGYSPA 287
            .||    :....|:|.:|..:.||..        .:||...||:..          ..:.|::..
  Rat   190 WRKVEKLNEKEDNNGPAPPRANSSQC--------RSAPELLGPMPTDLEPGPVPPENILDGFTEP 246

  Fly   288 P-----GTTATGAGMNDGVHHAAHAP 308
            |     ..|.|.:..|:.....|..|
  Rat   247 PVLLTSDQTLTSSQHNESAERVAVTP 272

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
gsb-n	NP_523862.1	HTH_CRP	20..141	CDD:481199	17/98 (17%)
		Homeodomain	183..239	CDD:459649	26/55 (47%)
Nobox	NP_001178942.1	Homeodomain	136..192	CDD:459649	26/55 (47%)