Protein Alignment gsb-n and repo

DIOPT Version :10

• Sequence 1: NP_523862.1
• Gene: gsb-n / 38004
• FlyBaseID: FBgn0001147
• Length: 449
• Species: Drosophila melanogaster
• Sequence 2: NP_477026.1
• Gene: repo / 47285
• FlyBaseID: FBgn0011701
• Length: 612
• Species: Drosophila melanogaster
• Alignment Length: 366
• Identity: 98/366 - (26%)
• Similarity: 137/366 - (37%)
• Gaps: 98/366 - (26%)

  Fly   130 PPSTSSISRLLRGSDRGSEDGRKDYTIN-------GILGG-------RDSDISDTESEP-GIPLK 179
            |||:|  |.::.|:..|:.:.....:..       |..||       :|...|..:.:| ||
  Fly   243 PPSSS--STVVNGTTNGTGNANSSSSAGVGIQGAAGTAGGVAAPAAKKDGSSSKKKGDPNGI--- 302

  Fly   180 RKQRRSRTTFTAEQLEALERAFSRTQYPDVYTREELAQTTALTEARIQVWFSNRRARLRKHSGGS 244
             |::::||||||.|||.|||||.|..||||:.|||||....|:|:|:||||.||||:.|||.
  Fly   303 -KKKKTRTTFTAYQLEELERAFERAPYPDVFAREELAIKLNLSESRVQVWFQNRRAKWRKHE--- 363

  Fly   245 NSGLSPMNSGSSNVGVGVGLSGATAPLGYGPLG--------------VGSMAGY----------- 284
                .|..:|.....     :..||.|..|.|.              .|||..:
  Fly   364 ----PPRKTGYIKTS-----TPPTATLNPGTLAPPFTSYPQTTTVTPPGSMDSWTSYQTPYELTP 419

  Fly   285 -----SPAPGTTATGAGMNDG-VHHAAHAPSSHH----------SAATAAAAAHHHTQM---GGY 330
                 |||.....|.:|.... ||.:...|..|:          .|.|.:.|.:....:   |.|
  Fly   420 QFSLLSPAASPYGTYSGQYGAYVHESQLFPMRHYEYGSPTRMEMGATTGSVAGNGDESVANGGSY 484

  Fly   331 DL--VQSAAQHGFPGGFAQPGHFGSQNYYHQDYSKLTIDDFSKLTADSVSKISPSLHLSDNYSKL 393
            ..  :|:|.|.....|.....|...|....|...     :...|:|:....:....|.|....:|
  Fly   485 QTAELQTAQQQQLADGTLVTVHAHQQQQQQQQQL-----NGKYLSAEEAKYVHLQCHQSGGGLEL 544

  Fly   394 EAPSNWSQAAYHAAANYNAHVAQHQLNDYAAAAAHGNPASA 434
                         :...:.|:.:.|...|...|. |..|||
  Fly   545 -------------SPGASCHLVEAQGQHYVTTAT-GGAASA 571

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
gsb-n	NP_523862.1	HTH_CRP	20..141	CDD:481199	5/10 (50%)
		Homeodomain	183..239	CDD:459649	35/55 (64%)
repo	NP_477026.1	Homeodomain	313..361	CDD:459649	30/47 (64%)