DRSC/TRiP Functional Genomics Resources

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Protein Alignment gsb-n and Dr

DIOPT Version :10

Sequence 1:NP_523862.1 Gene:gsb-n / 38004 FlyBaseID:FBgn0001147 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_477324.1 Gene:Dr / 45285 FlyBaseID:FBgn0000492 Length:515 Species:Drosophila melanogaster


Alignment Length:121 Identity:35/121 - (28%)
Similarity:52/121 - (42%) Gaps:23/121 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   169 DTESEPGIPLK----RKQRRSRTTFTAEQLEALERAFSRTQYPDVYTREELAQTTALTEARIQVW 229
            |....|.|...    :..|:.||.||.:||.:||:.|...||..:..|.|.:.:..|||.::::|
  Fly   404 DANEPPRIKCNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLRLTETQVKIW 468

  Fly   230 FSNRRARLRKHSGGSNSGLSPMNSGSSNVGVGVGLSGATAPLGYGPLGV-GSMAGY 284
            |.||||:.::........:.                  .|.||.|..|. .:||||
  Fly   469 FQNRRAKAKRLQEAEIEKIK------------------MAALGRGAPGAQWAMAGY 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gsb-nNP_523862.1 HTH_CRP 20..141 CDD:481199
Homeodomain 183..239 CDD:459649 23/55 (42%)
DrNP_477324.1 Homeodomain 422..478 CDD:459649 23/55 (42%)
Blue background indicates that the domain is not in the aligned region.

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