DRSC/TRiP Functional Genomics Resources

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Protein Alignment gsb-n and dmbx2

DIOPT Version :10

Sequence 1:NP_523862.1 Gene:gsb-n / 38004 FlyBaseID:FBgn0001147 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_001003563.1 Gene:dmbx2 / 445169 ZFINID:ZDB-GENE-040801-82 Length:266 Species:Danio rerio


Alignment Length:61 Identity:40/61 - (65%)
Similarity:47/61 - (77%) Gaps:0/61 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   179 KRKQRRSRTTFTAEQLEALERAFSRTQYPDVYTREELAQTTALTEARIQVWFSNRRARLRK 239
            ::|||||||.|:..||:|||:||.:||||||..||.||....|.||||||||.||||:.||
Zfish    68 QQKQRRSRTAFSVSQLQALEKAFQQTQYPDVGMRERLAVCINLPEARIQVWFKNRRAKFRK 128

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gsb-nNP_523862.1 HTH_CRP 20..141 CDD:481199
Homeodomain 183..239 CDD:459649 36/55 (65%)
dmbx2NP_001003563.1 Homeodomain 72..128 CDD:459649 36/55 (65%)
Blue background indicates that the domain is not in the aligned region.

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