DRSC/TRiP Functional Genomics Resources

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Protein Alignment gsb-n and Ptx1

DIOPT Version :9

Sequence 1:NP_523862.1 Gene:gsb-n / 38004 FlyBaseID:FBgn0001147 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster


Alignment Length:403 Identity:109/403 - (27%)
Similarity:147/403 - (36%) Gaps:160/403 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 STSSISRLLRGSDRGSEDGRKDY------TINGILGGRDSDISDTESEPGIPLKRK-QRRSRTTF 189
            ||||||.  |..||  :||.:..      |.|....|.|..::.:..||....|.| |||.||.|
  Fly   211 STSSISN--RSRDR--KDGNRSVNETTIKTENISSSGHDEPMTTSGEEPKNDKKNKRQRRQRTHF 271

  Fly   190 TAEQLEALERAFSRTQYPDVYTREELAQTTALTEARIQVWFSNRRARLRKH-------------- 240
            |::||:.||..|||.:|||:.||||:|..|.|||||::|||.||||:.||.              
  Fly   272 TSQQLQELEHTFSRNRYPDMSTREEIAMWTNLTEARVRVWFKNRRAKWRKRERNAMNAAVAAADF 336

  Fly   241 -SGGSNSGLSP-------------------------------------------------MNSGS 255
             ||.....:.|                                                 .|:|:
  Fly   337 KSGFGTQFMQPFADDSLYSSYPYNNWTKVPSPLGTKPFPWPVNPLGSMVAGNHHQNSVNCFNTGA 401

  Fly   256 SNVGVGVGLSGATAPLGYGPLG--------VGSMAGYSPAPGTT-------------ATGAGMND 299
            |    ||.:|...|.:..|.:|        ||::.  :|.|.||             ...:.|:.
  Fly   402 S----GVAVSMNNASMLPGSMGSSLSNTSNVGAVG--APCPYTTPANPYMYRSAAEPCMSSSMSS 460

  Fly   300 GV--------HHAA-------HAPSSHHSAATAAAAAHHHTQMGGYDLV------------QSAA 337
            .:        .||:       .|||....:.:|..:|..:|.:|..|:|            |...
  Fly   461 SIATLRLKAKQHASAGFGSPYSAPSPVSRSNSAGLSACQYTGVGVTDVVXENALGALLNQHQHHL 525

  Fly   338 QH---------GFPGGFAQPGHFGSQNYYHQDYSKLTID--DFSKLTADSVSKISPSLHLSD--- 388
            ||         |.|.|..|  |.|  |..|  :|.|.:|  |...:..      .||.|..:   
  Fly   526 QHFSGGSVGGSGVPNGMQQ--HSG--NMLH--HSNLGLDHSDLGLVGG------GPSNHQDEGNH 578

  Fly   389 -----NYSKLEAP 396
                 |.|.:|||
  Fly   579 SLEGSNKSPMEAP 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gsb-nNP_523862.1 PAX 20..141 CDD:278709 6/8 (75%)
Homeobox 185..238 CDD:278475 32/52 (62%)
Ptx1NP_001138130.2 Homeobox 268..320 CDD:278475 32/51 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450930
Domainoid 1 1.000 55 1.000 Domainoid score I4097
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.840

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