Protein Alignment gsb-n and Ubx

DIOPT Version :10

• Sequence 1: NP_523862.1
• Gene: gsb-n / 38004
• FlyBaseID: FBgn0001147
• Length: 449
• Species: Drosophila melanogaster
• Sequence 2: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Alignment Length: 268
• Identity: 63/268 - (23%)
• Similarity: 88/268 - (32%)
• Gaps: 92/268 - (34%)

  Fly    20 GQGRVNQLGGVFINGRPLPNHIRLKIVEMAASG--VRPCVISRQLR------------VSH---- 66
            |.|..|.......||:..|           |.|  |||...:...|            |||
  Fly   129 GAGNANGGNAANANGQNNP-----------AGGMPVRPSACTPDSRVGGYLDTSGGSPVSHRGGS 182

  Fly    67 --GCVSKILNRYQETGSIRPGV--------------IGGSKPKVTSPEIETRIDELRK-ENPSIF 114
              |.|| :.......|.::.||              |.|:..:..:      ...|.: .|.:.:
  Fly   183 AGGNVS-VSGGNGNAGGVQSGVGVAGAGTAWNANCTISGAAAQTAA------ASSLHQASNHTFY 240

  Fly   115 SWEIREKLIKEGFADPPSTSSISRLLRGSDRGSEDGRKDYTINGILGGRDSDISDTESEP----- 174
            .|    ..|.....:.|:.|.|              |.|.|   ..||..:|:....||.
  Fly   241 PW----MAIAGECPEDPTKSKI--------------RSDLT---QYGGISTDMGKRYSESLAGSL 284

  Fly   175 --------GIPLKRKQRRSRTTFTAEQLEALERAFSRTQYPDVYTREELAQTTALTEARIQVWFS 231
                    |:     :||.|.|:|..|...||:.|....|.....|.|:|....|||.:|::||.
  Fly   285 LPDWLGTNGL-----RRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQ 344

  Fly   232 NRRARLRK 239
            |||.:|:|
  Fly   345 NRRMKLKK 352

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
gsb-n	NP_523862.1	HTH_CRP	20..141	CDD:481199	30/155 (19%)
		Homeodomain	183..239	CDD:459649	23/55 (42%)
Ubx	NP_536752.1	Homeodomain	296..352	CDD:459649	23/55 (42%)