DRSC/TRiP Functional Genomics Resources

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Protein Alignment gsb-n and PHOX2A

DIOPT Version :10

Sequence 1:NP_523862.1 Gene:gsb-n / 38004 FlyBaseID:FBgn0001147 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_001412025.1 Gene:PHOX2A / 401 HGNCID:691 Length:312 Species:Homo sapiens


Alignment Length:225 Identity:68/225 - (30%)
Similarity:87/225 - (38%) Gaps:69/225 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 EP-GIPLKRKQRRSRTTFTAEQLEALERAFSRTQYPDVYTREELAQTTALTEARI---------- 226
            || |:..||||||.|||||:.||:.|||.|:.|.|||:|||||||....|||||:          
Human    80 EPSGLHEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQDLTRALRPR 144

  Fly   227 ------------------QVWFSNRRARLRKH-----------SGGSNSG--------------- 247
                              ||||.||||:.||.           :.|:..|               
Human   145 ADPVRSPTLVQADWPLCPQVWFQNRRAKFRKQERAASAKGAAGAAGAKKGEARCSSEDDDSKEST 209

  Fly   248 LSPMNSGSSNVGVGVGLSGATAPLGYGPLGVGSMAGYSPAPGT----------TATGAGMNDGVH 302
            .||....::::........|:..|...||.|...:|..|.||.          .|.|.|...|..
Human   210 CSPTPDSTASLPPPPAPGLASPRLSPSPLPVALGSGPGPGPGPQPLKGALWAGVAGGGGGGPGAG 274

  Fly   303 HA----AHAPSSHHSAATAAAAAHHHTQMG 328
            .|    |..|:.......:...:..|.:.|
Human   275 AAELLKAWQPAESGPGPFSGVLSSFHRKPG 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gsb-nNP_523862.1 HTH_CRP 20..141 CDD:481199
Homeodomain 183..239 CDD:459649 37/83 (45%)
PHOX2ANP_001412025.1 Homeodomain 91..175 CDD:459649 37/83 (45%)
Blue background indicates that the domain is not in the aligned region.

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