DRSC/TRiP Functional Genomics Resources

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Protein Alignment gsb-n and eyg

DIOPT Version :10

Sequence 1:NP_523862.1 Gene:gsb-n / 38004 FlyBaseID:FBgn0001147 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_524042.2 Gene:eyg / 39419 FlyBaseID:FBgn0000625 Length:670 Species:Drosophila melanogaster


Alignment Length:569 Identity:147/569 - (25%)
Similarity:212/569 - (37%) Gaps:230/569 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ANSLRPLFAGYPFQGQGRVNQLGGVFINGRPLPNHIRL-------KIVEMAA-SGVRPCVISRQL 62
            |.|..|.....| .|.|.....||: .:|...|....|       :::|.:. .|:|...|::.:
  Fly    78 ATSTSPTSVQIP-PGFGGGGSTGGI-PHGAGGPTGSTLNTLMSQHRLLEFSRFGGLRGYDIAQHM 140

  Fly    63 RVSHGCVSKILNRYQETGSIR-PGVIGGSKPKVTSPEIETRIDELRKENPSIFSWEIREKLIKEG 126
            ....|.|||:|      ||:| ||:||||||||.:|.:.::|::.::|||:||:|||||:||.||
  Fly   141 LTQQGAVSKLL------GSLRPPGLIGGSKPKVATPTVVSKIEQYKRENPTIFAWEIRERLISEG 199

  Fly   127 F---ADPPSTSSISRLLRGSDRGSEDGRKDYT----------------------INGILGGR--- 163
            .   |..||.|||:|:||  :|.:|....::.                      ...:.||:   
  Fly   200 VCTNATAPSVSSINRILR--NRAAERVATEFARTAAYGLYPPPPHPYGSFTWHPAGNVPGGQGVP 262

  Fly   164 ----------------------------------------------------------------- 163
                                                                             
  Fly   263 PPPPPSALWSVAAPTLANLPPSAASAVPVSTCGSLSSAHLMAGGAGGTPTNRAISPGSGSHDTLE 327

  Fly   164 --------DSDISDTESEPGIPLKRKQRRSRTTFTAEQLEALERAFSRTQYPDVYTREELAQTTA 220
                    |||..|.:.||      |.||:||||:.||||.||:.|.::.||.|.|||.|:..|:
  Fly   328 SADENRHIDSDYLDDDDEP------KFRRNRTTFSPEQLEELEKEFDKSHYPCVSTRERLSSRTS 386

  Fly   221 LTEARIQVWFSNRRARLRKHSGGS------NSGLSPMNSGSSNVGVGVGLSGATAPLGYGPLGVG 279
            |:|||:|||||||||:.|:|...:      :|..:|::|..||                      
  Fly   387 LSEARVQVWFSNRRAKWRRHQRMNLLKRQRSSPANPLHSQQSN---------------------- 429

  Fly   280 SMAGYSPAPGTTATGAGMNDGVHHAAHAPSSHHSAATAAAAA------------HHHTQMGGYDL 332
                  .||.::.|              ||:|.||:|:|..|            ..|:..|....
  Fly   430 ------DAPASSPT--------------PSNHSSASTSAPVAPVPPPQQPLPLCGDHSPQGPPPS 474

  Fly   333 VQSAAQHGFPGGFAQPGHFGSQNYYHQDYSKLTIDDFSKLTADSVSKISPSLHLSDNYSKLEAPS 397
            |.....||.|||          :::|.                       .|||..:.:.|:..|
  Fly   475 VLLHPLHGPPGG----------HHHHH-----------------------PLHLPTHPAALQLLS 506

  Fly   398 NW------SQAAYHAAANYNAHVAQHQLNDYAA--AAAH---GNPASAY 435
            ::      .|...|.......|..|.||:....  ||.|   |...||:
  Fly   507 HYHQQQQQQQQQQHQQQQQQHHQQQQQLSPSGCNPAANHLSMGGERSAF 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gsb-nNP_523862.1 HTH_CRP 20..141 CDD:481199 52/132 (39%)
Homeodomain 183..239 CDD:459649 34/55 (62%)
eygNP_524042.2 HTH_ARSR 120..217 CDD:481197 45/102 (44%)
Homeodomain 349..405 CDD:459649 34/55 (62%)

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