DRSC/TRiP Functional Genomics Resources

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Protein Alignment gsb-n and eyg

DIOPT Version :9

Sequence 1:NP_523862.1 Gene:gsb-n / 38004 FlyBaseID:FBgn0001147 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_001014582.1 Gene:eyg / 39419 FlyBaseID:FBgn0000625 Length:670 Species:Drosophila melanogaster


Alignment Length:569 Identity:147/569 - (25%)
Similarity:212/569 - (37%) Gaps:230/569 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ANSLRPLFAGYPFQGQGRVNQLGGVFINGRPLPNHIRL-------KIVEMAA-SGVRPCVISRQL 62
            |.|..|.....| .|.|.....||: .:|...|....|       :::|.:. .|:|...|::.:
  Fly    78 ATSTSPTSVQIP-PGFGGGGSTGGI-PHGAGGPTGSTLNTLMSQHRLLEFSRFGGLRGYDIAQHM 140

  Fly    63 RVSHGCVSKILNRYQETGSIR-PGVIGGSKPKVTSPEIETRIDELRKENPSIFSWEIREKLIKEG 126
            ....|.|||:|      ||:| ||:||||||||.:|.:.::|::.::|||:||:|||||:||.||
  Fly   141 LTQQGAVSKLL------GSLRPPGLIGGSKPKVATPTVVSKIEQYKRENPTIFAWEIRERLISEG 199

  Fly   127 F---ADPPSTSSISRLLRGSDRGSEDGRKDYT----------------------INGILGGR--- 163
            .   |..||.|||:|:||  :|.:|....::.                      ...:.||:   
  Fly   200 VCTNATAPSVSSINRILR--NRAAERVATEFARTAAYGLYPPPPHPYGSFTWHPAGNVPGGQGVP 262

  Fly   164 ----------------------------------------------------------------- 163
                                                                             
  Fly   263 PPPPPSALWSVAAPTLANLPPSAASAVPVSTCGSLSSAHLMAGGAGGTPTNRAISPGSGSHDTLE 327

  Fly   164 --------DSDISDTESEPGIPLKRKQRRSRTTFTAEQLEALERAFSRTQYPDVYTREELAQTTA 220
                    |||..|.:.||      |.||:||||:.||||.||:.|.::.||.|.|||.|:..|:
  Fly   328 SADENRHIDSDYLDDDDEP------KFRRNRTTFSPEQLEELEKEFDKSHYPCVSTRERLSSRTS 386

  Fly   221 LTEARIQVWFSNRRARLRKHSGGS------NSGLSPMNSGSSNVGVGVGLSGATAPLGYGPLGVG 279
            |:|||:|||||||||:.|:|...:      :|..:|::|..||                      
  Fly   387 LSEARVQVWFSNRRAKWRRHQRMNLLKRQRSSPANPLHSQQSN---------------------- 429

  Fly   280 SMAGYSPAPGTTATGAGMNDGVHHAAHAPSSHHSAATAAAAA------------HHHTQMGGYDL 332
                  .||.::.|              ||:|.||:|:|..|            ..|:..|....
  Fly   430 ------DAPASSPT--------------PSNHSSASTSAPVAPVPPPQQPLPLCGDHSPQGPPPS 474

  Fly   333 VQSAAQHGFPGGFAQPGHFGSQNYYHQDYSKLTIDDFSKLTADSVSKISPSLHLSDNYSKLEAPS 397
            |.....||.|||          :::|.                       .|||..:.:.|:..|
  Fly   475 VLLHPLHGPPGG----------HHHHH-----------------------PLHLPTHPAALQLLS 506

  Fly   398 NW------SQAAYHAAANYNAHVAQHQLNDYAA--AAAH---GNPASAY 435
            ::      .|...|.......|..|.||:....  ||.|   |...||:
  Fly   507 HYHQQQQQQQQQQHQQQQQQHHQQQQQLSPSGCNPAANHLSMGGERSAF 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gsb-nNP_523862.1 PAX 20..141 CDD:278709 52/132 (39%)
Homeobox 185..238 CDD:278475 32/52 (62%)
eygNP_001014582.1 HTH 120..217 CDD:304362 45/102 (44%)
Homeobox 352..404 CDD:278475 32/51 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450813
Domainoid 1 1.000 55 1.000 Domainoid score I4097
eggNOG 1 0.900 - - E1_KOG0849
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45636
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.840

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