Protein Alignment gsb-n and shox2

DIOPT Version :10

• Sequence 1: NP_523862.1
• Gene: gsb-n / 38004
• FlyBaseID: FBgn0001147
• Length: 449
• Species: Drosophila melanogaster
• Sequence 2: NP_957490.1
• Gene: shox2 / 394171
• ZFINID: ZDB-GENE-040426-1457
• Length: 299
• Species: Danio rerio
• Alignment Length: 364
• Identity: 106/364 - (29%)
• Similarity: 136/364 - (37%)
• Gaps: 107/364 - (29%)

  Fly    78 ETGSIRPGVIGGSKPKVTSPEIETRIDELRKENPSIFSWEIREKLIKEG--FADPPSTSSISRLL 140
            ||||:|      ::..:::       |..|:|..||....:|...::|.  .|...|..|.|..|
Zfish    30 ETGSVR------NRESLSA-------DPNREEISSITRSGVRSSPVREADMLASERSRDSSSPKL 81

  Fly   141 RGSDRGSEDGRKDYTINGILGGRDSDISDTESEPGIPLKRKQRRSRTTFTAEQLEALERAFSRTQ 205
                   .||..|      :..|..|....|.|  ...|.|||||||.||.|||..|||.|..|.
Zfish    82 -------TDGNTD------MKERKEDCKPLEDE--TQTKIKQRRSRTNFTLEQLNELERLFDETH 131

  Fly   206 YPDVYTREELAQTTALTEARIQVWFSNRRARLRKHSGGSNSGLSPMNSGSSNVGVGVGLSGATAP 270
            |||.:.||||:|...|:|||:||||.||||:.||            .....:.||.:|.:.....
Zfish   132 YPDAFMREELSQRLGLSEARVQVWFQNRRAKCRK------------QENQLHKGVLIGAASQFEA 184

  Fly   271 LGYGP-LGVGSMAGYSPAPGTTATGAGMNDGVHHAAHAPSSHHSAA-----TAAAAAHHHTQMGG 329
            ....| :.||::.  .|....:           |....|.|....|     :|.|.||||
Zfish   185 CRVAPYVNVGALR--MPFQQDS-----------HCNVPPFSFQVQAQLQLDSAVAHAHHH----- 231

  Fly   330 YDLVQSAAQHG----FPGGFAQPGHFGSQNYYHQDYSKLTIDDFSKLTADSVSKISPSLHLSDNY 390
              |....|.|.    ||   |.|  ||.              ..:.|.|:|.|
Zfish   232 --LHSHLAAHAPYMMFP---APP--FGL--------------PLATLAAESAS------------ 263

  Fly   391 SKLEAPSNWSQAAYHAAANYNAHVAQHQLNDYAAAAAHG 429
                |.|..:.||.....|.|:.:|..:|.....|||.|
Zfish   264 ----AASVVAAAAAAKTTNKNSSIADLRLKAKKHAAALG 298

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
gsb-n	NP_523862.1	HTH_CRP	20..141	CDD:481199	16/64 (25%)
		Homeodomain	183..239	CDD:459649	35/55 (64%)
shox2	NP_957490.1	Homeodomain	109..165	CDD:459649	35/55 (64%)
		OAR	278..295	CDD:461067	4/16 (25%)