Protein Alignment gsb-n and Gsc2

DIOPT Version :10

• Sequence 1: NP_523862.1
• Gene: gsb-n / 38004
• FlyBaseID: FBgn0001147
• Length: 449
• Species: Drosophila melanogaster
• Sequence 2: NP_001102316.1
• Gene: Gsc2 / 363831
• RGDID: 1305333
• Length: 214
• Species: Rattus norvegicus
• Alignment Length: 232
• Identity: 67/232 - (28%)
• Similarity: 88/232 - (37%)
• Gaps: 70/232 - (30%)

  Fly    48 MAASGV--------RPCVISRQLRVSHGCVSKILNRYQETGSIR--PGVIGGSKPK--------- 93
            ||.:|.        |||..|         :..||:...|...:.  |..:||..|.
  Rat    14 MATAGSAASHRDPGRPCPFS---------IEHILSSLPERRPVARPPQPVGGRNPAEPDEPEAPA 69

  Fly    94 ---------VTSPEIETRIDELRKENPSI-FSWEIREKLIKEGFADPPSTSSISRLLRGSDRGSE 148
                     ..:|....|........|.: ..|.:|        ..|.|.|.::....||.
  Rat    70 PAAPCACCCCCNPRAAPRGTPETASGPGLRLGWPLR--------LAPESPSPLTAPSTGSP---- 122

  Fly   149 DGRKDYTINGILGGRDSDISDTESEPGIPLKRKQRRSRTTFTAEQLEALERAFSRTQYPDVYTRE 213
                  .:.|..|            || | :|:.||.||.|:.|||:|||..|.:.|||||.|||
  Rat   123 ------ALTGTSG------------PG-P-QRRTRRHRTIFSEEQLQALEALFVQNQYPDVGTRE 167

  Fly   214 ELAQTTALTEARIQVWFSNRRARLRKHSGGSNSGLSP 250
            .||....|.|.|::|||.||||:.|.....|:|.|:|
  Rat   168 RLAVRIRLREERVEVWFKNRRAKWRHQKRVSSSRLAP 204

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
gsb-n	NP_523862.1	HTH_CRP	20..141	CDD:481199	22/121 (18%)
		Homeodomain	183..239	CDD:459649	32/55 (58%)
Gsc2	NP_001102316.1	Homeodomain	137..193	CDD:459649	32/55 (58%)