DRSC/TRiP Functional Genomics Resources

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Protein Alignment gsb-n and eve

DIOPT Version :10

Sequence 1:NP_523862.1 Gene:gsb-n / 38004 FlyBaseID:FBgn0001147 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_523670.2 Gene:eve / 36039 FlyBaseID:FBgn0000606 Length:376 Species:Drosophila melanogaster


Alignment Length:324 Identity:78/324 - (24%)
Similarity:106/324 - (32%) Gaps:111/324 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 PPS----TSSISRLLRGSDRGSEDGRKDYTINGILGGRDSDISDTESEPGIPLKRKQRRSRTTFT 190
            |||    .||....|.|| ||||                           ||.....||.||.||
  Fly    42 PPSPNECLSSPDNSLNGS-RGSE---------------------------IPADPSVRRYRTAFT 78

  Fly   191 AEQLEALERAFSRTQYPDVYTREELAQTTALTEARIQVWFSNRRARLRKHSGGSNSGLSPMNSGS 255
            .:||..||:.|.:..|.....|.|||....|.|:.|:|||.|||.:.::..              
  Fly    79 RDQLGRLEKEFYKENYVSRPRRCELAAQLNLPESTIKVWFQNRRMKDKRQR-------------- 129

  Fly   256 SNVGVGVGLSGATAPLGYGPLGVGSMAGYS-PAPGTTATGAGMND-GVHHAAHAPSSHHSAATAA 318
                :.|....|              |.|| ||...:...|..|. |:.:..:||::..:||.||
  Fly   130 ----IAVAWPYA--------------AVYSDPAFAASILQAAANSVGMPYPPYAPAAAAAAAAAA 176

  Fly   319 AAAHHHTQMGGYDLVQSAAQHGFPGGFAQ------PGHFGSQNYYHQDYSKLTIDDFSKLTADSV 377
            |.|.:.....|..          |.|..|      |||.|...:                     
  Fly   177 AVATNPMMATGMP----------PMGMPQMPTMQMPGHSGHAGH--------------------- 210

  Fly   378 SKISPSLHLSDNYSKLEAPSNWSQAAYHAAANYNAHVAQHQLNDYAAAAAHGNPASAYSHPLPT 441
                ||.:....|:....|:.  .|..|.|..:..|  .|.:...|..:::...|:.....||:
  Fly   211 ----PSPYGQYRYTPYHIPAR--PAPPHPAGPHMHH--PHMMGSSATGSSYSAGAAGLLGALPS 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gsb-nNP_523862.1 HTH_CRP 20..141 CDD:481199 5/14 (36%)
Homeodomain 183..239 CDD:459649 25/55 (45%)
eveNP_523670.2 Homeodomain 71..127 CDD:459649 25/55 (45%)

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