Protein Alignment gsb-n and prd

DIOPT Version :10

• Sequence 1: NP_523862.1
• Gene: gsb-n / 38004
• FlyBaseID: FBgn0001147
• Length: 449
• Species: Drosophila melanogaster
• Sequence 2: NP_723721.1
• Gene: prd / 34629
• FlyBaseID: FBgn0003145
• Length: 613
• Species: Drosophila melanogaster
• Alignment Length: 558
• Identity: 237/558 - (42%)
• Similarity: 284/558 - (50%)
• Gaps: 145/558 - (25%)

  Fly    10 RPLFAGYPF-----QGQGRVNQLGGVFINGRPLPNHIRLKIVEMAASGVRPCVISRQLRVSHGCV 69
            ||.|.||..     .||||||||||||||||||||:||||||||||.|:||||||||||||||||
  Fly    12 RPFFNGYSTMQDMNSGQGRVNQLGGVFINGRPLPNNIRLKIVEMAADGIRPCVISRQLRVSHGCV 76

  Fly    70 SKILNRYQETGSIRPGVIGGSKPKVTSPEIETRIDELRKENPSIFSWEIREKLIKEGFAD---PP 131
            |||||||||||||||||||||||::.:||||.||:|.::.:|.:||||||||||:||..|   .|
  Fly    77 SKILNRYQETGSIRPGVIGGSKPRIATPEIENRIEEYKRSSPGMFSWEIREKLIREGVCDRSTAP 141

  Fly   132 STSSISRLLRGSD----------RGSE--DGRKDYTING--ILGGR-------DSDISDTESEPG 175
            |.|:||||:||.|          .||.  ||.|..:..|  :.||.       |.||||.|||||
  Fly   142 SVSAISRLVRGRDAPLDNDMSSASGSPAGDGTKASSSCGSDVSGGHHNNGKPSDEDISDCESEPG 206

  Fly   176 IPLKRKQRRSRTTFTAEQLEALERAFSRTQYPDVYTREELAQTTALTEARIQVWFSNRRARLRKH 240
            |.|||||||.||||:|.||:.|||||.||||||:||||||||.|.|||||||||||||||||||.
  Fly   207 IALKRKQRRCRTTFSASQLDELERAFERTQYPDIYTREELAQRTNLTEARIQVWFSNRRARLRKQ 271

  Fly   241 ----SGGSNSGLSPMNSGSSNVGVGVGLSGATAPLGYGPLGVGSMAGYSPAPGT--TAT------ 293
                |||:..|.:   :..|:|.....|....:       .|.|||..:..||:  .||
  Fly   272 HTSVSGGAPGGAA---ASVSHVAASSSLPSVVS-------SVPSMAPLAMMPGSLDPATVYQQQY 326

  Fly   294 ---GAGMNDGVHHAAHAPSSHHSAATAAAAAHHHTQMGGYDLVQSAAQHGFPG--GFAQP-GH-- 350
               |:..|..|..||...||:.|........|||.   .|:...:.|.:..||  |...| |:
  Fly   327 DFYGSHANISVSAAAPMASSNLSPGITTTPPHHHQ---FYNPSANTASYIMPGENGNTTPTGNII 388

  Fly   351 -----------FGSQNYYHQDYSK----------------------------------------- 363
                       :|::...||...:
  Fly   389 VSSYETQLGSVYGTETETHQTMPRNESPNESVSSAFGQLPPTPNSLSAVVSGAGVTSSSGANSGA 453

  Fly   364 -------------------LTIDDFSKLTA---------DSVSKISPSLHLSDNYSKLEAPSNWS 400
                               |.::....:.|         .|:..:.|:..||...| |.:.|:.|
  Fly   454 DPSQSLANASAGSEELSAALKVESVDLIAASQSQLYGGWSSMQALRPNAPLSPEDS-LNSTSSTS 517

  Fly   401 QAAYHAAANYNAHVAQHQLNDYAAAAAHGNPASAYSHP 438
            | |....|:...|..|| ...||:..|.|:..|.:.||
  Fly   518 Q-ALDVTAHQMFHPYQH-TPQYASYPAPGHAHSHHGHP 553

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
gsb-n	NP_523862.1	HTH_CRP	20..141	CDD:481199	98/123 (80%)
		Homeodomain	183..239	CDD:459649	46/55 (84%)
prd	NP_723721.1	PAX	27..154	CDD:238076	100/126 (79%)
		Homeodomain	214..270	CDD:459649	46/55 (84%)