DRSC/TRiP Functional Genomics Resources

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Protein Alignment gsb-n and LOC3292406

DIOPT Version :10

Sequence 1:NP_523862.1 Gene:gsb-n / 38004 FlyBaseID:FBgn0001147 Length:449 Species:Drosophila melanogaster
Sequence 2:XP_558008.5 Gene:LOC3292406 / 3292406 VectorBaseID:AGAMI1_004211 Length:275 Species:Anopheles gambiae


Alignment Length:63 Identity:37/63 - (58%)
Similarity:50/63 - (79%) Gaps:0/63 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   179 KRKQRRSRTTFTAEQLEALERAFSRTQYPDVYTREELAQTTALTEARIQVWFSNRRARLRKHS 241
            :|:|||:|||||.:||:.||:.|.:|.||||:.|||:|....|:|||:||||.||||:.||.:
Mosquito    21 RRRQRRNRTTFTPQQLQELEQLFKKTHYPDVFLREEVALRINLSEARVQVWFQNRRAKWRKQA 83

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gsb-nNP_523862.1 HTH_CRP 20..141 CDD:481199
Homeodomain 183..239 CDD:459649 33/55 (60%)
LOC3292406XP_558008.5 None
Blue background indicates that the domain is not in the aligned region.

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