Protein Alignment gsb-n and Vsx1

DIOPT Version :10

• Sequence 1: NP_523862.1
• Gene: gsb-n / 38004
• FlyBaseID: FBgn0001147
• Length: 449
• Species: Drosophila melanogaster
• Sequence 2: NP_572232.2
• Gene: Vsx1 / 31470
• FlyBaseID: FBgn0263511
• Length: 837
• Species: Drosophila melanogaster
• Alignment Length: 371
• Identity: 89/371 - (23%)
• Similarity: 122/371 - (32%)
• Gaps: 109/371 - (29%)

  Fly   157 NGILGGRDSD--ISDTESEPGIPLKRKQRRSRTTFTAEQLEALERAFSRTQYPDVYTREELAQTT 219
            |.:|.....|  :....:.||...|.|:|..||.||:.|||.||:||....||||..||.|:..|
  Fly   368 NSLLAAHGGDVLVGPGGTGPGGKKKNKRRHGRTIFTSSQLEELEKAFKEAHYPDVSARELLSMKT 432

  Fly   220 ALTEARIQVWFSNRRARLRK--------------------------------HSGGSNSGLSPM- 251
            .|.|.|||||:.||||:.||                                .|...:..::|.
  Fly   433 GLAEDRIQVWYQNRRAKWRKTEKCWGHSTKMAEYGLYGAMVRHSLPLPETIIKSAKEDESVAPWL 497

  Fly   252 ------------------------NSGSSNVGVGVGLSGATAPLGYGPLGVGSMAGYSPAPGTTA 292
                                    .|..:|.....| |...:|:  ....:..:...:|.|   |
  Fly   498 LGMHKKSLEAAELLKSDESDRETPTSDDTNTSYSAG-STHNSPI--SSFSISRLLFDAPPP---A 556

  Fly   293 TGAGMNDGVHHAAHAPSSHHSA---ATAAAAAH---HHTQMGGYDLVQSAAQHGF---------- 341
            .|:....|.||..|....||.|   |.|.|.||   ||.|.......|....|..
  Fly   557 AGSAGGKGHHHHHHHHKGHHHAHVHAQAQAHAHMLLHHQQQQQQQQQQQQHHHHLHAAENSLQQQ 621

  Fly   342 ------------------PGGFAQPGH--FGSQNYYH-----QDYSKLTIDDFSKLTADSVSKIS 381
                              .|....|.|  :..|.:.|     |...:.......:.......:..
  Fly   622 QVAGTGSGSGSGSGSGTGAGSTGPPAHHPYNQQQHLHHLQQLQQQQQQQQQQAQQQQQHHHHQHH 686

  Fly   382 PSLHLSDNYSKLEAPSNWSQAAYHAAANYNAHVAQHQLNDYAAAAA 427
            .|:|...:::   |.:.:::||..|||...|..|.....:.|||||
  Fly   687 HSVHHMHHHN---AAAGYAEAAVAAAAAAAAVAAAANARNAAAAAA 729

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
gsb-n	NP_523862.1	HTH_CRP	20..141	CDD:481199
		Homeodomain	183..239	CDD:459649	31/55 (56%)
Vsx1	NP_572232.2	Homeodomain	395..452	CDD:459649	31/56 (55%)