DRSC/TRiP Functional Genomics Resources

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Protein Alignment gsb-n and arxa

DIOPT Version :10

Sequence 1:NP_523862.1 Gene:gsb-n / 38004 FlyBaseID:FBgn0001147 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_571459.1 Gene:arxa / 30657 ZFINID:ZDB-GENE-990415-15 Length:453 Species:Danio rerio


Alignment Length:480 Identity:135/480 - (28%)
Similarity:181/480 - (37%) Gaps:171/480 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DMSSANSLRPLFAGYPFQGQGRVNQLGGVFI-NGRPLPNHI----RLKIVEMAASGVRPCVISRQ 61
            ||.....||.|:..            ||.:: :||....|:    |.::::.|...::   ||:.
Zfish    72 DMHLPPKLRRLYGP------------GGKYLDSGRGFHEHLEKGERERLLDQACESLK---ISQA 121

  Fly    62 LRVSHGCVSKILNRYQETGSIRPGVIGGSKPKVTSPEIETRIDELRKENPSIFSWEIREKLIKEG 126
            .:||   :|: ...|:|.........|      .|||      .:.:|...:.:.:..|.::||.
Zfish   122 PQVS---ISR-SKSYRENAPFSQSDEG------QSPE------HMAQELVELSTLKFEEDVVKEE 170

  Fly   127 FADPPSTSSISRLLRGSDRGSEDGRKDYTINGILGGRDSDISDTESEPGIPLKRKQRRSRTTFTA 191
            .....|.|........:|...:||.....::          :.::||.|: |||||||.|||||:
Zfish   171 ACGDNSLSPKDEESLHNDGDVKDGEDSVCLS----------AGSDSEEGM-LKRKQRRYRTTFTS 224

  Fly   192 EQLEALERAFSRTQYPDVYTREELAQTTALTEARIQVWFSNRRARLRKHSGGSNSGLSPMNSGSS 256
            .|||.|||||.:|.||||:||||||....|||||:||||.||||:.||.               .
Zfish   225 YQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNRRAKWRKR---------------E 274

  Fly   257 NVGVGVGLSGATAPLGYGPLGVGSMAGYSPAPGTTATGAGMNDGVHHAAHAPSSHH--------- 312
            ..||....:|...|   |||.                          ||| |.||:         
Zfish   275 KAGVQAHPTGLPFP---GPLA--------------------------AAH-PLSHYLEGGPFPPH 309

  Fly   313 ------SAATAAAAAHHHTQMGGYDLVQSAAQHGFPGGFAQP--------------GHF-GSQNY 356
                  ||.||||||             :||   || |.|.|              |.| |:..:
Zfish   310 PHPALESAWTAAAAA-------------AAA---FP-GLAPPPNSSALPPATPLGLGTFLGTAMF 357

  Fly   357 YHQDY----------------SKLTIDDFSKLTADSV-SKISPSLHLSDNYSKLEAPSNWSQAAY 404
            .|..:                |..|.....:.||..| |.:.||..|.      |.||:.|..|.
Zfish   358 RHPAFIGPTFGRLFSSMGPLTSASTAAALLRQTAPPVESPVQPSAALP------EPPSSSSSTAA 416

  Fly   405 HAAANYNA--------HVAQ-HQLN 420
            ...|:..|        |.|| .|||
Zfish   417 DRRASSIAALRLKAKEHSAQLTQLN 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gsb-nNP_523862.1 HTH_CRP 20..141 CDD:481199 24/125 (19%)
Homeodomain 183..239 CDD:459649 39/55 (71%)
arxaNP_571459.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 49..75 2/2 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 124..149 9/40 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 170..212 8/52 (15%)
Homeodomain 216..272 CDD:459649 39/55 (71%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 390..418 12/33 (36%)
OAR 417..435 CDD:461067 3/17 (18%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 421..434 1/12 (8%)
Blue background indicates that the domain is not in the aligned region.

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