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Protein Alignment gsb-n and mixl1
DIOPT Version :9
Sequence 1: | NP_523862.1 |
Gene: | gsb-n / 38004 |
FlyBaseID: | FBgn0001147 |
Length: | 449 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_571015.3 |
Gene: | mixl1 / 30115 |
ZFINID: | ZDB-GENE-000208-20 |
Length: | 327 |
Species: | Danio rerio |
Alignment Length: | 76 |
Identity: | 36/76 - (47%) |
Similarity: | 49/76 - (64%) |
Gaps: | 5/76 - (6%) |
- Green bases have known domain annotations that are detailed below.
Fly 183 RRSRTTFTAEQLEALERAFSRTQYPDVYTREELAQTTALTEARIQVWFSNRRARLRKHSGGSNSG 247
||.||.||.:|::.||:.:..|:|||:|.||:|...|.|.|:||||||.||||:.|: ..|
Zfish 59 RRKRTNFTQQQIDVLEKVYLDTKYPDIYLREKLEALTGLPESRIQVWFQNRRAKSRR-----QVG 118
Fly 248 LSPMNSGSSNV 258
:|..|..|.|:
Zfish 119 ISIPNKTSGNI 129
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
gsb-n | NP_523862.1 |
PAX |
20..141 |
CDD:278709 |
|
Homeobox |
185..238 |
CDD:278475 |
28/52 (54%) |
mixl1 | NP_571015.3 |
Homeobox |
61..114 |
CDD:278475 |
28/52 (54%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG0849 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000011 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
4 | 3.810 |
|
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