DRSC/TRiP Functional Genomics Resources

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Protein Alignment gsb-n and RAX

DIOPT Version :10

Sequence 1:NP_523862.1 Gene:gsb-n / 38004 FlyBaseID:FBgn0001147 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_038463.2 Gene:RAX / 30062 HGNCID:18662 Length:346 Species:Homo sapiens


Alignment Length:174 Identity:58/174 - (33%)
Similarity:76/174 - (43%) Gaps:57/174 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   169 DTESEPGIPL---------------KRKQRRSRTTFTAEQLEALERAFSRTQYPDVYTREELAQT 218
            :....||:|:               |:|.||:|||||..||..|||||.::.|||||:|||||..
Human   108 EARPSPGLPVGPATGEAKLSEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGK 172

  Fly   219 TALTEARIQVWFSNRRARLRKHS-------------------GGSNSGLSPMNSGSSNVGVGVGL 264
            ..|.|.|:||||.||||:.|:..                   ...::.|||:.:|.   |.|.|.
Human   173 VNLPEVRVQVWFQNRRAKWRRQEKLEVSSMKLQDSPLLSFSRSPPSATLSPLGAGP---GSGGGP 234

  Fly   265 SGATAPL--------------------GYGPLGVGSMAGYSPAP 288
            :|...||                    |:||......|.|:|.|
Human   235 AGGALPLESWLGPPLPGGGATALQSLPGFGPPAQSLPASYTPPP 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gsb-nNP_523862.1 HTH_CRP 20..141 CDD:481199
Homeodomain 183..239 CDD:459649 35/55 (64%)
RAXNP_038463.2 Octapeptide motif 33..40
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 46..145 11/36 (31%)
Homeodomain 137..193 CDD:459649 35/55 (64%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 194..318 17/88 (19%)
OAR 319..335 CDD:461067
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 323..336
Nuclear localization signal. /evidence=ECO:0000255 329..333
Blue background indicates that the domain is not in the aligned region.

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