Protein Alignment gsb-n and Alx4

DIOPT Version :10

• Sequence 1: NP_523862.1
• Gene: gsb-n / 38004
• FlyBaseID: FBgn0001147
• Length: 449
• Species: Drosophila melanogaster
• Sequence 2: NP_001100023.1
• Gene: Alx4 / 296511
• RGDID: 1310201
• Length: 399
• Species: Rattus norvegicus
• Alignment Length: 260
• Identity: 77/260 - (29%)
• Similarity: 104/260 - (40%)
• Gaps: 86/260 - (33%)

  Fly   130 PPSTSSISRLLRGSDRGSEDGRKDYTINGILGGRD-------SDISDTESEPGIPLKRKQRRSRT 187
            ||.:..:         |.::........|..|.:|       |.:..|:||..   |.|:||:||
  Rat   155 PPDSEPV---------GMDNSYLSVKETGAKGPQDRAGAEIPSPLEKTDSESS---KGKKRRNRT 207

  Fly   188 TFTAEQLEALERAFSRTQYPDVYTREELAQTTALTEARIQVWFSNRRARLRKHSG---------- 242
            |||:.|||.||:.|.:|.|||||.||:||..|.|||||:||||.||||:.||...
  Rat   208 TFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRKRERFGQMQQVRTH 272

  Fly   243 -------------------------GSNSGLSPM---------------------NSGSSNVGVG 261
                                     |:|...||:                     .||:|:|...
  Rat   273 FSTAYELPLLTRAENYAQIQNPSWIGNNGAASPVPACVVPCDPVPACMSPHAHPPGSGASSVSDF 337

  Fly   262 VGLSGATAPLGYGPLG-VGSMAGYSPAPGTTATGAGMNDGVHH------AAHAPSSHHSAATAAA 319
            :.:|||.:.:|...:| :...||.||.    ..|..||.....      |....:..||||.:.|
  Rat   338 LSVSGAGSHVGQTHMGSLFGAAGISPG----LNGYEMNGEPDRKTSSIAALRMKAKEHSAAISWA 398

  Fly   320  319
              Rat   399  398

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
gsb-n	NP_523862.1	HTH_CRP	20..141	CDD:481199	2/10 (20%)
		Homeodomain	183..239	CDD:459649	37/55 (67%)
Alx4	NP_001100023.1	Homeodomain	203..259	CDD:459649	37/55 (67%)
		OAR	375..393	CDD:461067	2/17 (12%)