DRSC/TRiP Functional Genomics Resources

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Protein Alignment gsb-n and Prrx1

DIOPT Version :10

Sequence 1:NP_523862.1 Gene:gsb-n / 38004 FlyBaseID:FBgn0001147 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_722543.1 Gene:Prrx1 / 266813 RGDID:628884 Length:245 Species:Rattus norvegicus


Alignment Length:187 Identity:70/187 - (37%)
Similarity:91/187 - (48%) Gaps:25/187 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 SISRLLRGSDRG-----------SEDGRKDYTINGILGGRDSDISDTE---SEPGIPLKRKQRRS 185
            |:|.||...:.|           .|.||......|:..|.|:...|.:   ||.  ..||||||:
  Rat    35 SVSHLLDLEEAGDMVAAQADESVGEAGRSLLESPGLTSGSDTPQQDNDQLNSEE--KKKRKQRRN 97

  Fly   186 RTTFTAEQLEALERAFSRTQYPDVYTREELAQTTALTEARIQVWFSNRRARLRKHSGG--SNSGL 248
            ||||.:.||:||||.|.||.|||.:.||:||:...|||||:||||.||||:.|::...  :|...
  Rat    98 RTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLANKNA 162

  Fly   249 SPMNSGSSNVGV---GVGLSGATAPLGYGPLGVGS----MAGYSPAPGTTATGAGMN 298
            |.:.|.|.:|..   .:....|..|..|...|..|    ||.||......:...|:|
  Rat   163 SLLKSYSGDVTAVEQPIVPRPAPRPTDYLSWGTASPYSAMATYSATCANNSPAQGIN 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gsb-nNP_523862.1 HTH_CRP 20..141 CDD:481199 3/5 (60%)
Homeodomain 183..239 CDD:459649 35/55 (64%)
Prrx1NP_722543.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..24
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 54..103 19/50 (38%)
Homeodomain 99..151 CDD:459649 32/51 (63%)
OAR 219..235 CDD:461067 1/1 (100%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 222..235
Blue background indicates that the domain is not in the aligned region.

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