Protein Alignment gsb-n and Prop1

DIOPT Version :10

• Sequence 1: NP_523862.1
• Gene: gsb-n / 38004
• FlyBaseID: FBgn0001147
• Length: 449
• Species: Drosophila melanogaster
• Sequence 2: NP_705891.1
• Gene: Prop1 / 266738
• RGDID: 628759
• Length: 223
• Species: Rattus norvegicus
• Alignment Length: 164
• Identity: 61/164 - (37%)
• Similarity: 76/164 - (46%)
• Gaps: 30/164 - (18%)

  Fly   130 PPSTSSISRLLRGSDRGSEDGRKDYTINGILGGRDSDISDTESEPGIPLKRKQRRSRTTFTAEQL 194
            |.|.::...|:...||..|..::   ::|...||.. :......|     ..:||.||||...||
  Rat    23 PESQAASGTLISTVDRSPETSKR---LSGTGLGRPK-LCPQRGRP-----HSRRRHRTTFNPAQL 78

  Fly   195 EALERAFSRTQYPDVYTREELAQTTALTEARIQVWFSNRRARLRKHSGGSNSGLSPMNSGSSNVG 259
            ..||.||.|.||||::.||.|||.|.|:||||||||.||||:.||.   ..|.|.|.
  Rat    79 GQLESAFGRNQYPDIWVREGLAQDTGLSEARIQVWFQNRRAKQRKQ---ERSLLQPT-------- 132

  Fly   260 VGVGLSGATAPLGYGPLGVGSMAGYSPAPGTTAT 293
              ..||.||..        |.::..||.|.|..|
  Rat   133 --AHLSPATFS--------GFLSESSPYPYTYTT 156

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
gsb-n	NP_523862.1	HTH_CRP	20..141	CDD:481199	3/10 (30%)
		Homeodomain	183..239	CDD:459649	36/55 (65%)
Prop1	NP_705891.1	Homeodomain	67..123	CDD:459649	36/55 (65%)