DRSC/TRiP Functional Genomics Resources

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Protein Alignment gsb-n and Rax

DIOPT Version :10

Sequence 1:NP_523862.1 Gene:gsb-n / 38004 FlyBaseID:FBgn0001147 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_038861.2 Gene:Rax / 19434 MGIID:109632 Length:342 Species:Mus musculus


Alignment Length:176 Identity:64/176 - (36%)
Similarity:83/176 - (47%) Gaps:50/176 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   164 DSDISDTESEPGIPLKRKQRRSRTTFTAEQLEALERAFSRTQYPDVYTREELAQTTALTEARIQV 228
            ||.:|:.|     |.|:|.||:|||||..||..|||||.::.|||||:|||||....|.|.|:||
Mouse   123 DSKLSEEE-----PPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQV 182

  Fly   229 WFSNRRARLRKHS-------------------GGSNSGLSPMNSGSSNVGVGVGLSGATAPL--- 271
            ||.||||:.|:..                   ...:|.|:|:.:|.   |.|.|..|:..||   
Mouse   183 WFQNRRAKWRRQEKLEVSSMKLQDSPLLSFSRSPPSSALAPLGTGP---GSGSGPPGSALPLEPW 244

  Fly   272 -----------------GYGPLGVGSMAGYSPAP---GTTATGAGM 297
                             |:||.|.|..|.|:|.|   .:...|.|:
Mouse   245 LGPPLPGGGATALQSLPGFGPPGQGLPASYTPPPPFLNSAPLGPGL 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gsb-nNP_523862.1 HTH_CRP 20..141 CDD:481199
Homeodomain 183..239 CDD:459649 35/55 (64%)
RaxNP_038861.2 Octapeptide motif 33..40
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 44..140 9/21 (43%)
Homeodomain 137..193 CDD:459649 35/55 (64%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 208..295 21/86 (24%)
OAR 316..331 CDD:461067
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 319..332
Nuclear localization signal. /evidence=ECO:0000255 325..329
Blue background indicates that the domain is not in the aligned region.

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