Protein Alignment gsb-n and unc-42

DIOPT Version :10

• Sequence 1: NP_523862.1
• Gene: gsb-n / 38004
• FlyBaseID: FBgn0001147
• Length: 449
• Species: Drosophila melanogaster
• Sequence 2: NP_001263845.1
• Gene: unc-42 / 192081
• WormBaseID: WBGene00006778
• Length: 279
• Species: Caenorhabditis elegans
• Alignment Length: 224
• Identity: 78/224 - (34%)
• Similarity: 105/224 - (46%)
• Gaps: 35/224 - (15%)

  Fly   130 PPSTSSISRLLRG-SDRGSEDGRKDYTINGILGGR--DSDISDTESEPG--IPLKR-------KQ 182
            |.|..::|..||. ||..|:...|.....| |||.  .|.|:...:.|.  ..|:|       .:
 Worm    37 PSSLDTVSASLRPISDPSSDGAFKKIKTEG-LGGSVFGSSIAGVTNTPARLCSLERPESERLNSR 100

  Fly   183 RRSRTTFTAEQLEALERAFSRTQYPDVYTREELAQTTALTEARIQVWFSNRRARLRKHSGGSNSG 247
            ||.|||||.|||:.|:.||.::.|||:|.|||||:.|.|.||||||||.||||:.|||....|..
 Worm   101 RRHRTTFTQEQLQELDAAFQKSHYPDIYVREELARITKLNEARIQVWFQNRRAKHRKHEKQLNKA 165

  Fly   248 LSPMNSGSSNVGVGVGLSGATAPLGYGPLGVGSMAGYSPAPGTTATGAGMN---DGVHHAAHAPS 309
            ::|.:|..||....:...| ..|......|....:...|.|..||:.:..|   :.:.:..|:.:
 Worm   166 INPPHSFLSNPANTLMRQG-MYPAALNRDGFWYQSYQRPMPYPTASPSYSNSFTNPIANFGHSIT 229

  Fly   310 SHH------------------SAATAAAA 320
            |..                  ||||||.:
 Worm   230 SFQADDEFYQKSLALRMTTTPSAATAATS 258

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
gsb-n	NP_523862.1	HTH_CRP	20..141	CDD:481199	3/10 (30%)
		Homeodomain	183..239	CDD:459649	36/55 (65%)
unc-42	NP_001263845.1	Homeodomain	101..157	CDD:459649	36/55 (65%)