Sequence 1: | NP_523862.1 | Gene: | gsb-n / 38004 | FlyBaseID: | FBgn0001147 | Length: | 449 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_035168.1 | Gene: | Pax4 / 18506 | MGIID: | 97488 | Length: | 349 | Species: | Mus musculus |
Alignment Length: | 363 | Identity: | 131/363 - (36%) |
---|---|---|---|
Similarity: | 177/363 - (48%) | Gaps: | 58/363 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 20 GQGRVNQLGGVFINGRPLPNHIRLKIVEMAASGVRPCVISRQLRVSHGCVSKILNRYQETGSIRP 84
Fly 85 GVIGGSKPKVTSPEIETRIDELRKENPSIFSWEIREKLIKEGFA---DPPSTSSISRLLRGSDRG 146
Fly 147 SEDGRKDYT-------INGILGGRDSDISDTESEPGIPLKRKQRRSRTTFTAEQLEALERAFSRT 204
Fly 205 QYPDVYTREELAQTTALTEARIQVWFSNRRARLRKHS---------GGSNSGLSPMNSGSSNVGV 260
Fly 261 GVGLSGATAPLGYGPLGVGSMAGYSPAPGT-------TATGAGMNDGVHHAAHAP---------- 308
Fly 309 --SSHHSAATAAAAAH--HHTQMGGYDLVQSAAQHGFP 342 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
gsb-n | NP_523862.1 | PAX | 20..141 | CDD:278709 | 65/123 (53%) |
Homeobox | 185..238 | CDD:278475 | 28/52 (54%) | ||
Pax4 | NP_035168.1 | PAX | 5..129 | CDD:128645 | 65/123 (53%) |
PAI subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 | 8..64 | 36/55 (65%) | |||
RED subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 | 83..131 | 20/47 (43%) | |||
Homeobox | 174..226 | CDD:278475 | 28/51 (55%) | ||
Transcription repression | 278..349 | 16/71 (23%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG0849 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |