DRSC/TRiP Functional Genomics Resources

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Protein Alignment gsb-n and ceh-17

DIOPT Version :10

Sequence 1:NP_523862.1 Gene:gsb-n / 38004 FlyBaseID:FBgn0001147 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_491393.1 Gene:ceh-17 / 172059 WormBaseID:WBGene00000440 Length:237 Species:Caenorhabditis elegans


Alignment Length:91 Identity:50/91 - (54%)
Similarity:61/91 - (67%) Gaps:6/91 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 TINGILGG--RDSDISDTESEPGIPL----KRKQRRSRTTFTAEQLEALERAFSRTQYPDVYTRE 213
            |.:.:|.|  |.|.:....|..|.||    :|||||.|||||:.||:.|||:|..|.|||:||||
 Worm   116 TSSNVLNGLPRSSLVGALCSTGGAPLNPAERRKQRRIRTTFTSGQLKELERSFCETHYPDIYTRE 180

  Fly   214 ELAQTTALTEARIQVWFSNRRARLRK 239
            |:|....|||||:||||.||||:.||
 Worm   181 EIAMRIDLTEARVQVWFQNRRAKYRK 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gsb-nNP_523862.1 HTH_CRP 20..141 CDD:481199
Homeodomain 183..239 CDD:459649 36/55 (65%)
ceh-17NP_491393.1 DLL_N 19..112 CDD:463567
Homeodomain 150..206 CDD:459649 36/55 (65%)
Blue background indicates that the domain is not in the aligned region.

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