DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gsb-n and al

DIOPT Version :10

Sequence 1:NP_523862.1 Gene:gsb-n / 38004 FlyBaseID:FBgn0001147 Length:449 Species:Drosophila melanogaster
Sequence 2:XP_061512474.1 Gene:al / 1277963 VectorBaseID:AGAMI1_004552 Length:353 Species:Anopheles gambiae


Alignment Length:331 Identity:97/331 - (29%)
Similarity:129/331 - (38%) Gaps:106/331 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 ADPPSTSSISRLLRGSDRGSEDGRKDYTINGILGG-RDSDISDTESEPG---IPLKRKQRRSRTT 188
            |.||..|.:       :|.:..|:    :.|..|| .:|.:||..|:.|   ...||||||.|||
Mosquito    18 ARPPQGSPL-------ERSASTGQ----LMGSSGGDPNSPLSDPHSDDGGDDFAPKRKQRRYRTT 71

  Fly   189 FTAEQLEALERAFSRTQYPDVYTREELAQTTALTEARIQVWFSNRRARLRKHSGGSNSGLSPMNS 253
            ||:.|||.||:|||||.||||:||||||....||||||||||.||||:.||              
Mosquito    72 FTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWRK-------------- 122

  Fly   254 GSSNVGVGVGLSGATAPLG--YGPLGVGSMAGYSPAPGTTATGAGMNDGVHHAAHAPSSH----- 311
             ...||          |.|  |.|.    :|.....|..|.....:...       |.||     
Mosquito   123 -QEKVG----------PQGHPYNPY----LASAGQVPSATVVAPSLPPN-------PFSHLGFNL 165

  Fly   312 -HSAATAAAAAHHHTQMGGYDLVQSAAQHGFPGGFAQPGHFGSQNYYHQDYSKLTIDDFSKLTAD 375
             .....|:.||..:..:||..::.||                   |::|.:              
Mosquito   166 RKPFDAASLAAFRYPSLGGSHMLPSA-------------------YFNQFH-------------- 197

  Fly   376 SVSKISPSLHLSDNYSKLEAPSNWSQAA---YHAAANYNAHVAQHQLNDYAAAAAHGNPASAYSH 437
               ::||.....|.:.:...|.......   |..:|::...:|.       .:||...|.:..|.
Mosquito   198 ---RVSPLSSFVDEFCRAPPPPLLPPGVGTFYTPSASFQTLLAN-------ISAAQRAPPAMPSK 252

  Fly   438 PLPTQG 443
            | ||.|
Mosquito   253 P-PTSG 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gsb-nNP_523862.1 HTH_CRP 20..141 CDD:481199 4/12 (33%)
Homeodomain 183..239 CDD:459649 41/55 (75%)
alXP_061512474.1 None

Return to query results.
Submit another query.