DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gsb-n and toy

DIOPT Version :10

Sequence 1:NP_523862.1 Gene:gsb-n / 38004 FlyBaseID:FBgn0001147 Length:449 Species:Drosophila melanogaster
Sequence 2:XP_061505354.1 Gene:toy / 1272206 VectorBaseID:AGAMI1_003483 Length:351 Species:Anopheles gambiae


Alignment Length:324 Identity:120/324 - (37%)
Similarity:165/324 - (50%) Gaps:91/324 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SSANSLRPLFAGYPFQGQGRVNQLGGVFINGRPLPNHIRLKIVEMAASGVRPCVISRQLRVSHGC 68
            |:..|:..:| |....|...:||||||::||||||:..|.||||:|.||.|||.|||.|:||:||
Mosquito    16 SNIQSVNSIF-GCNSSGHSGINQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGC 79

  Fly    69 VSKILNRYQETGSIRPGVIGGSKPKVTSPEIETRIDELRKENPSIFSWEIREKLIKEGFADP--- 130
            |||||.||.|||||:|..||||||:|.:..:.::|.|.:.|.||||:||||::|:.||..:.   
Mosquito    80 VSKILGRYYETGSIKPRAIGGSKPRVATAAVVSKIAEYKAECPSIFAWEIRDRLLSEGTCNNDNI 144

  Fly   131 PSTSSISRLLR------------------------------------------------------ 141
            ||.|||:|:||                                                      
Mosquito   145 PSVSSINRVLRNLASNKETSSQSNETVYEKIKLFNNTSGHWTWCQNIGSGQFNFSSHPIPHLSLK 209

  Fly   142 -GSDRGSEDGRKDYT-----------INGILGG-------------RDSDISDTESEPGIPLKRK 181
             .:::.::.|:.|:|           ::..:|.             :.|...|.:||..:.||||
Mosquito   210 TSTEQPTKPGKSDWTAYASGCPLIFFLSSSVGSVPTANCCLEEMSDKYSSEDDEDSELRLKLKRK 274

  Fly   182 QRRSRTTFTAEQLEALERAFSRTQYPDVYTREELAQTTALTEARIQV--------WFSNRRARL 237
            .:|:||:||.||:|.|||.|.||.||||:.||.|::...|.||||||        |....|..:
Mosquito   275 LQRNRTSFTNEQIENLEREFERTHYPDVFARERLSERIQLPEARIQVMLLCPAARWLRGNRGNM 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gsb-nNP_523862.1 HTH_CRP 20..141 CDD:481199 72/123 (59%)
Homeodomain 183..239 CDD:459649 30/63 (48%)
toyXP_061505354.1 None

Return to query results.
Submit another query.