DRSC/TRiP Functional Genomics Resources

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Protein Alignment gsb-n and Alx4

DIOPT Version :10

Sequence 1:NP_523862.1 Gene:gsb-n / 38004 FlyBaseID:FBgn0001147 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_031468.1 Gene:Alx4 / 11695 MGIID:108359 Length:399 Species:Mus musculus


Alignment Length:260 Identity:77/260 - (29%)
Similarity:104/260 - (40%) Gaps:86/260 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 PPSTSSISRLLRGSDRGSEDGRKDYTINGILGGRD-------SDISDTESEPGIPLKRKQRRSRT 187
            ||.:..:         |.::........|..|.:|       |.:..|:||..   |.|:||:||
Mouse   155 PPDSEPV---------GMDNSYLSVKETGAKGPQDRASAEIPSPLEKTDSESN---KGKKRRNRT 207

  Fly   188 TFTAEQLEALERAFSRTQYPDVYTREELAQTTALTEARIQVWFSNRRARLRKHSG---------- 242
            |||:.|||.||:.|.:|.|||||.||:||..|.|||||:||||.||||:.||...          
Mouse   208 TFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRKRERFGQMQQVRTH 272

  Fly   243 -------------------------GSNSGLSPM---------------------NSGSSNVGVG 261
                                     |:|...||:                     .||:|:|...
Mouse   273 FSTAYELPLLTRAENYAQIQNPSWIGNNGAASPVPACVVPCDPVPACMSPHAHPPGSGASSVSDF 337

  Fly   262 VGLSGATAPLGYGPLG-VGSMAGYSPAPGTTATGAGMNDGVHH------AAHAPSSHHSAATAAA 319
            :.:|||.:.:|...:| :...||.||.    ..|..||.....      |....:..||||.:.|
Mouse   338 LSVSGAGSHVGQTHMGSLFGAAGISPG----LNGYEMNGEPDRKTSSIAALRMKAKEHSAAISWA 398

  Fly   320  319
            Mouse   399  398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gsb-nNP_523862.1 HTH_CRP 20..141 CDD:481199 2/10 (20%)
Homeodomain 183..239 CDD:459649 37/55 (67%)
Alx4NP_031468.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 68..133
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 171..206 11/37 (30%)
Homeodomain 203..259 CDD:459649 37/55 (67%)
OAR 375..393 CDD:461067 2/17 (12%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 379..392 1/12 (8%)
Blue background indicates that the domain is not in the aligned region.

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