DRSC/TRiP Functional Genomics Resources

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Protein Alignment gsb-n and Alx3

DIOPT Version :10

Sequence 1:NP_523862.1 Gene:gsb-n / 38004 FlyBaseID:FBgn0001147 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_031467.1 Gene:Alx3 / 11694 MGIID:1277097 Length:343 Species:Mus musculus


Alignment Length:285 Identity:86/285 - (30%)
Similarity:113/285 - (39%) Gaps:99/285 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 GGRDSDISDTESEPG-------IPL-------------KRKQRRSRTTFTAEQLEALERAFSRTQ 205
            ||.....|:.::.||       :||             |.|:||:||||:..|||.||:.|.:|.
Mouse   112 GGPRDGPSNVQASPGPCLASLSVPLSPGLPDSMELAKTKSKKRRNRTTFSTFQLEELEKVFQKTH 176

  Fly   206 YPDVYTREELAQTTALTEARIQVWFSNRRARLRKHS--GGSNSGLSPMNSG-------------- 254
            |||||.||:||..|.|||||:||||.||||:.||..  |....|.:|..:.              
Mouse   177 YPDVYAREQLALRTDLTEARVQVWFQNRRAKWRKRERYGKMQEGRNPFTTAYDISVLPRTDSHPQ 241

  Fly   255 -SSNVGVGVGLSGATAPLGYGPLGVGS--MAGYSPAPGTTATGAGMNDGVHHAAHAPSSHHSAAT 316
             .:::....|......|....|.|:.|  |:.||.:.|..|...|:                  .
Mouse   242 LQNSLWPSPGSGSPGGPCLMSPEGIPSPCMSPYSHSHGNVAGFMGV------------------P 288

  Fly   317 AAAAAHHHTQMGGYDLVQSAAQHGFP---GGFA-QPGHFGSQNYYHQDYSKLTIDDFSKLTADSV 377
            |:.|||    .|.|.:      ||||   ||.: :|...|       ||.               
Mouse   289 ASPAAH----PGIYSI------HGFPPALGGHSFEPSPDG-------DYK--------------- 321

  Fly   378 SKISPSLHLSDNYSKLEAPS--NWS 400
               |||| :|......|.|.  ||:
Mouse   322 ---SPSL-VSLRMKPKEPPGLLNWT 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gsb-nNP_523862.1 HTH_CRP 20..141 CDD:481199
Homeodomain 183..239 CDD:459649 36/55 (65%)
Alx3NP_031467.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..122 3/9 (33%)
Homeodomain 154..210 CDD:459649 36/55 (65%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 309..343 14/60 (23%)
Blue background indicates that the domain is not in the aligned region.

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