Protein Alignment gsb-n and sia3

DIOPT Version :10

• Sequence 1: NP_523862.1
• Gene: gsb-n / 38004
• FlyBaseID: FBgn0001147
• Length: 449
• Species: Drosophila melanogaster
• Sequence 2: XP_002942209.2
• Gene: sia3 / 100490453
• XenbaseID: XB-GENE-480406
• Length: 247
• Species: Xenopus tropicalis
• Alignment Length: 244
• Identity: 57/244 - (23%)
• Similarity: 92/244 - (37%)
• Gaps: 89/244 - (36%)

  Fly     1 MDMSSANSLRPLFAGYPFQGQGRVNQLGGVFINGRPLPNHIRLKIVEM-AASGVRPCVISRQLRV 64
            ||.::.|::|           |.::.|....:. .||.|..:..::|: :..|     |.::::|
 Frog    29 MDKANVNTIR-----------GSIDLLPAAQVQ-VPLQNTWQQTLLELYSVLG-----IPQEVKV 76

  Fly    65 SHGCVSKILNRYQETGSIRPGVIGGSKPKVTSPEIETRIDELRKENPSIFS-------WEIREKL 122
            .. .:.||:...|.|.::.||:                     |:.||..|       ||..|::
 Frog    77 GR-TMHKIVRDDQSTSALSPGI---------------------KDKPSERSSCLKRPLWEEEERV 119

  Fly   123 IKEGFADPPSTSSISRLLRGSDRGSEDGRKDYTINGILGGRDSDISDTESEPGIPLKRKQRRSRT 187
            .|:..::|                                          |..:|....:.|.||
 Frog   120 CKKMKSEP------------------------------------------EDLLPTLSARSRKRT 142

  Fly   188 TFTAEQLEALERAFSRTQYPDVYTREELAQTTALTEARIQVWFSNRRAR 236
            .:|.||.:.|:..|....|||..:|..:||.|.:.|.||||||.|||||
 Frog   143 IYTKEQTDFLQNQFDINPYPDFVSRCHIAQLTGVPEPRIQVWFQNRRAR 191

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
gsb-n	NP_523862.1	HTH_CRP	20..141	CDD:481199	24/128 (19%)
		Homeodomain	183..239	CDD:459649	27/54 (50%)
sia3	XP_002942209.2	COG5576	<123..236	CDD:227863	30/111 (27%)
		Homeodomain	139..192	CDD:459649	27/53 (51%)