DRSC/TRiP Functional Genomics Resources

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Protein Alignment gsb-n and sia2

DIOPT Version :10

Sequence 1:NP_523862.1 Gene:gsb-n / 38004 FlyBaseID:FBgn0001147 Length:449 Species:Drosophila melanogaster
Sequence 2:XP_002942206.3 Gene:sia2 / 100489935 XenbaseID:XB-GENE-482070 Length:220 Species:Xenopus tropicalis


Alignment Length:150 Identity:48/150 - (32%)
Similarity:66/150 - (44%) Gaps:22/150 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 ENPSIFS---WEIREKLIKEGFADPPSTSSISRLLRGSDRGSEDGRKDY-TINGILGGRDSDISD 169
            ||..|..   ||:...|   |.   |..|.::|.|:..|  .|..::.. |.|.|..||...:.:
 Frog    50 ENQGILQKTIWELYSVL---GI---PQDSFLNRSLKHHD--LEPNKESLSTNNEISKGRKRPLYE 106

  Fly   170 TESEPG----------IPLKRKQRRSRTTFTAEQLEALERAFSRTQYPDVYTREELAQTTALTEA 224
            .|....          :|..|.:.|.||.::.||...|:..|....|||..:|..:|:.|.:.|.
 Frog   107 EEQRESKKPKLEMDHYLPSARTRCRRRTIYSKEQTLFLQDQFDLNPYPDFVSRCHIAKITGIPEP 171

  Fly   225 RIQVWFSNRRARLRKHSGGS 244
            ||||||.|||||....:.||
 Frog   172 RIQVWFQNRRARHLLRATGS 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gsb-nNP_523862.1 HTH_CRP 20..141 CDD:481199 10/34 (29%)
Homeodomain 183..239 CDD:459649 25/55 (45%)
sia2XP_002942206.3 COG5576 69..>183 CDD:227863 37/115 (32%)
Homeodomain 131..184 CDD:459649 24/52 (46%)

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