Protein Alignment gsb-n and shox

DIOPT Version :10

• Sequence 1: NP_523862.1
• Gene: gsb-n / 38004
• FlyBaseID: FBgn0001147
• Length: 449
• Species: Drosophila melanogaster
• Sequence 2: XP_004911874.1
• Gene: shox / 100486480
• XenbaseID: XB-GENE-920752
• Length: 334
• Species: Xenopus tropicalis
• Alignment Length: 295
• Identity: 96/295 - (32%)
• Similarity: 125/295 - (42%)
• Gaps: 72/295 - (24%)

  Fly    88 GGSKPK--VTSPEI-ETRIDELRKENPSIFSWEIREKLIKEGFADPPSTSSISRLLRGSDRGSE- 148
            |||..|  :|..|: ||.:..:|:...|           :....|...||:...|....:.|::
 Frog    63 GGSSKKETITYREVLETGLARVRELGNS-----------ETNLQDITDTSNHCPLHLYKEHGADS 116

  Fly   149 --DGRKDYTINGILGG-------RDSDISDTESEPGIPLKRKQRRSRTTFTAEQLEALERAFSRT 204
              |..|||....:..|       || |:. :|.|.| ..|.|||||||.||.|||..|||.|..|
 Frog   117 DKDKLKDYGSTRVSEGIYECKEKRD-DVK-SEDEDG-QTKLKQRRSRTNFTLEQLNELERLFDET 178

  Fly   205 QYPDVYTREELAQTTALTEARIQVWFSNRRARLRKHSGGSNSGLSPMNSGSSNVGVGVGLSGAT- 268
            .|||.:.||||:|...|:|||:||||.||||:.||..       :.|:.|...|.:|.|....|
 Frog   179 HYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQE-------NQMHKGGYGVILGTGSHLETC 236

  Fly   269 --APLGYGPLGVGSMAGYSPAPGTTATGAGMNDGVHH---------AAHAP-------------- 308
              ||  |..:|...|      |..........:||.|         |||||
 Frog   237 RVAP--YVNMGALRM------PFQQVQAQLQLEGVAHAHPHLHPHLAAHAPYLMFPPPPFGLPIA 293

  Fly   309 ---SSHHSAATAAAAAHHHTQMGGY-DLVQSAAQH 339
               .:..:||..||||..:::.... ||...|.:|
 Frog   294 SLADTASAAAVVAAAAKSNSKNSSIADLRLKARKH 328

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
gsb-n	NP_523862.1	HTH_CRP	20..141	CDD:481199	14/55 (25%)
		Homeodomain	183..239	CDD:459649	35/55 (64%)
shox	XP_004911874.1	Homeodomain	157..213	CDD:459649	35/55 (64%)
		OAR	314..330	CDD:461067	4/15 (27%)