Protein Alignment gsb-n and pax3b

DIOPT Version :10

• Sequence 1: NP_523862.1
• Gene: gsb-n / 38004
• FlyBaseID: FBgn0001147
• Length: 449
• Species: Drosophila melanogaster
• Sequence 2: NP_001315326.1
• Gene: pax3b / 100150137
• ZFINID: ZDB-GENE-080917-53
• Length: 469
• Species: Danio rerio
• Alignment Length: 479
• Identity: 208/479 - (43%)
• Similarity: 267/479 - (55%)
• Gaps: 89/479 - (18%)

  Fly     8 SLRPLF--AGYPFQ-----GQGRVNQLGGVFINGRPLPNHIRLKIVEMAASGVRPCVISRQLRVS 65
            ||.|.:  :|:|.:     |||||||||||||||||||||||.||||||..|:||||||||||||
Zfish    15 SLSPNYPRSGFPMEVSTPMGQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVS 79

  Fly    66 HGCVSKILNRYQETGSIRPGVIGGSKPKVTSPEIETRIDELRKENPSIFSWEIREKLIKEGFAD- 129
            ||||||||.|||||||||||.|||:|.|.|||::|.|::|.::|||.|||||||:||:|||..|
Zfish    80 HGCVSKILCRYQETGSIRPGAIGGTKSKTTSPDVEKRVEEYKRENPGIFSWEIRDKLLKEGICDR 144

  Fly   130 --PPSTSSISRLLRG------SDRGSEDGRKD--------------YTINGILGGRDS---DISD 169
              .|:.|||||::||      .:...|:..:|              ::|.|||..|.|   :.|:
Zfish   145 NNVPTVSSISRIMRGRSGTRADEEEEEEDEEDIERREREENAHRGAHSIEGILADRSSPSDEGSE 209

  Fly   170 TESEPGIPLKRKQRRSRTTFTAEQLEALERAFSRTQYPDVYTREELAQTTALTEARIQVWFSNRR 234
            .||||.:|||||||||||||||:|||.|||||.||.|||:||||||||...|||||:||||||||
Zfish   210 VESEPDLPLKRKQRRSRTTFTADQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRR 274

  Fly   235 ARLRKHSGGSNSGLSPMNSGSSNVGVGVGLSGATAPLGYGPLGVGSMAGY--SPAPGTTATGAGM 297
            ||.||.:|.:.  |...|.              ..|.|:....:.|::.|  |.:|...|.....
Zfish   275 ARWRKQAGANQ--LMAFNH--------------LIPGGFSHHAMSSLSPYQLSESPYPPAALPQD 323

  Fly   298 NDGVHHAAHAPSSHHSAATAAAAAHHHTQMGGYDLVQSAAQHGFPGGFAQPGHFGSQNYY----- 357
            :..||.....|.|.|.::..|...      ||.....| ::||:.|   ....||..|.:
Zfish   324 SGTVHRPQPLPHSSHQSSGGAGPE------GGASYCLS-SRHGYTG---YSDAFGPHNTHNNNAI 378

  Fly   358 ------------------HQDYSKLTIDDFSKLTADSVSKISPSLHLSDNYSKLEAPSNWSQAAY 404
                              |...::.::|..|.::: |.|:...||......|.|..|.::|.|::
Zfish   379 NNGLSSQVMGLITPSGASHPTQAEFSLDSGSSVSS-SCSQRMESLSSLPALSNLSNPQSYSSASF 442

  Fly   405 HAAANYNAHVAQHQLNDYAAAAAH 428
            ::.    .|...:|.:.|...:.|
Zfish   443 YSL----EHSGHYQYSQYGQNSFH 462

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
gsb-n	NP_523862.1	HTH_CRP	20..141	CDD:481199	94/123 (76%)
		Homeodomain	183..239	CDD:459649	45/55 (82%)
pax3b	NP_001315326.1	PAX	34..158	CDD:366005	94/123 (76%)
		Homeodomain	223..279	CDD:459649	45/55 (82%)
		Pax7	346..385	CDD:403540	9/48 (19%)