DRSC/TRiP Functional Genomics Resources

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Protein Alignment uzip and CG5506

DIOPT Version :10

Sequence 1:NP_523861.1 Gene:uzip / 38002 FlyBaseID:FBgn0004055 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_649021.1 Gene:CG5506 / 39992 FlyBaseID:FBgn0036766 Length:180 Species:Drosophila melanogaster


Alignment Length:115 Identity:26/115 - (22%)
Similarity:47/115 - (40%) Gaps:20/115 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LAPAKAAEHSVFTHKNASSVLGQLVTSSTLVWE---------SYDPKDATQLQFAVEGGKYV-TE 74
            :.||:....:...:.|..:...:|:....||.|         |:|       .|..:|...| |.
  Fly    64 ILPARVVAETGTAYFNTETTSSKLLVYDILVAERDVNYVWVRSFD-------GFYEKGAVAVGTT 121

  Fly    75 DEHYPMYVCRVPIDGIQVSGHTEKILQRHVCLAAHYKHG--KYDNFDVLM 122
            .::..::.||...||..:.| |..:..:.||:..|....  |:|.::||:
  Fly   122 VKNERVFCCRAKTDGGILIG-TLLLSSQKVCIIKHESLALRKFDKYEVLV 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
uzipNP_523861.1 PFM_unzipped-like 233..367 CDD:380803
putative membrane-spanning region 260..300 CDD:380803
putative variable loop region 325..355 CDD:380803
CG5506NP_649021.1 DUF3421 48..161 CDD:463390 22/104 (21%)
Blue background indicates that the domain is not in the aligned region.

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