DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment zip and VIIIA

DIOPT Version :9

Sequence 1:NP_523860.2 Gene:zip / 38001 FlyBaseID:FBgn0265434 Length:2056 Species:Drosophila melanogaster
Sequence 2:NP_175453.2 Gene:VIIIA / 841458 AraportID:AT1G50360 Length:1153 Species:Arabidopsis thaliana


Alignment Length:1236 Identity:383/1236 - (30%)
Similarity:616/1236 - (49%) Gaps:178/1236 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKSAWLALKSKSALH-----PKSEYPVSNIHYPKAANYRQTRNYLEIAAKMSEEVDRNDP--ELK 58
            :|:::.:||:..|.:     |.|::..:|:..|...:.:...|....:....:.|:.:.|  ...
plant     5 VKASFQSLKTMPADYRFLGSPISDHLETNLITPPNGHLKNGVNGTASSVGGMDSVNEDSPYSVRS 69

  Fly    59 YLSVERNQFND--------PATQAEWT------QKRLV--WVPHENQGFVAASIKREHGDEVEVE 107
            .|:.||:...|        .:...:|:      :|:::  ||...|..:....|....|:|..:.
plant    70 ILNGERSSIGDGDSILPLPESNDRKWSDTNVYARKKVLQFWVQLPNGNWELGKIMSTSGEESVIV 134

  Fly   108 LAETGKRVMILRDDIQKMNPPKFDKVEDMAELTCLNEASVLHNIKDRYYSGLIYTYSGLFCVVVN 172
            :.| ||.:.:..:.:...||...|.|:|:.:|:.|||.:||:|::.||...:|||.:|...|.||
plant   135 VTE-GKVLKVKSETLVPANPDILDGVDDLMQLSYLNEPAVLYNLEYRYNQDMIYTKAGPVLVAVN 198

  Fly   173 PYKKLPIYTEKIMERYKGIKRHEVPPHVFAITDSAYRNMLGDREDQSILCTGESGAGKTENTKKV 237
            |:|::|:|..:.:|.|:  ||....|||:||.|:|.|.|:.|..:|||:.:|||||||||..|..
plant   199 PFKEVPLYGNRNIEAYR--KRSNESPHVYAIADTAIREMIRDEVNQSIIISGESGAGKTETAKIA 261

  Fly   238 IQFLAYVAASKPKGSGAVPHPAVLINFSVNTNKYIKVKIMAQNQNQTIEVVNGLKMVEVNSNCQE 302
            :|:||.:..    |||                                                 
plant   262 MQYLAALGG----GSG------------------------------------------------- 273

  Fly   303 GELEQQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDASGFISGANIETYLLEKSRAIRQAK 367
              :|.::|:.||||||||||||::|||||||||.|.|:|..:|.||||.|:|:||||||.::..:
plant   274 --IEYEILKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSETGKISGAQIQTFLLEKSRVVQCTE 336

  Fly   368 DERTFHIFYQLLAGATPEQREKFILDDVKSYAFLSNGS-LPVPGVDDYAEFQATVKSMNIMGMTS 431
            .||::||||||.|||:|..|||..|...|.|.:|...: ..:.||||...|.|..::::|:.::.
plant   337 GERSYHIFYQLCAGASPTLREKLNLTSAKQYNYLKQSNCYSINGVDDAERFHAVKEALDIVHVSK 401

  Fly   432 EDFNSIFRIVSAVLLFGSMKFR-QERNNDQATLPDNTVAQKIAHLLGLSVTDMTRAFLTPRIKVG 495
            ||..::|.:::|||..|::.|. .:..|.....||.::: .:|.|:|.::.::..|.....::|.
plant   402 EDQENVFAMLAAVLWLGNVSFTIIDNENHVEPEPDESLS-TVAKLIGCNINELKLALSKRNMRVN 465

  Fly   496 RDFVTKAQTKEQVEFAVEAIAKACYERMFKWLVNRINRSLDRTKRQGASFIGILDMAGFEIFELN 560
            .|.:.:..|..|...|.:|:||:.|..:|.|||.:||:||...||:....|.|||:.|||.|..|
plant   466 NDTIVQKLTLSQAIDARDALAKSIYACLFDWLVEQINKSLAVGKRRTGRSISILDIYGFESFNKN 530

  Fly   561 SFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQPTIDLID-KPGGIMALLD 624
            ||||.||||.||:|||.||..:|.||||||.::||:|..:||. |.|..:.|.: ||.|:::|||
plant   531 SFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWTRVDFE-DNQECLSLFEKKPLGLLSLLD 594

  Fly   625 EECWFPKATDKTFVDKLVSAHSMHPKFMKTDFRGVADFAIVHYAGRVDYSAAKWLMKNMDPLNEN 689
            ||..||..||.|..:|| ..|.......:.| ||.| |.:.||||.|.|....:|.||.|.|:.:
plant   595 EESTFPNGTDLTLANKL-KQHLNDNSCFRGD-RGKA-FTVAHYAGEVTYETTGFLEKNRDLLHSD 656

  Fly   690 IVSLLQGSQ----DPFVVN--IWKDAEIVGMAQQALTDTQFGARTRKGMFRTVSHLYKEQLAKLM 748
            .:.||....    ..|..:  |:.:..:||...:|     .||.:::   .:|:..:|.||.:||
plant   657 SIQLLSSCSCHLPQAFASSMLIYSEKPLVGPLHKA-----GGADSQR---LSVATKFKGQLFQLM 713

  Fly   749 DTLRNTNPNFVRCIIPNHEKRAGKIDAPLVLDQLRCNGVLEGIRICRQGFPNRIPFQEFRQRYE- 812
            ..|.||.|:|:|||.||:.:.||..:..|||.||||.||||.:||.|.|||.|:...:|.:||. 
plant   714 QRLGNTTPHFIRCIKPNNVQSAGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMFHHKFARRYGF 778

  Fly   813 LLTPNVIPKGFMDGKKACEKMIQALELDSNLYRVGQSKIFFRAGVLAHLEEERD----------- 866
            ||..|:..|   |.......::....:...:|:||.:|:|||.|.:..||:.|:           
plant   779 LLLENIAAK---DPLSVSVAILHQFNILPEMYQVGYTKLFFRTGQIGVLEDTRNRTLHGILRLQS 840

  Fly   867 --------FKISDL---IVNFQAFCRGFLARRNYQKRLQQLNAIRIIQRNCAAYLKLR--NWQWW 918
                    .::.:|   |...|:|.||...|:.|.:.||:..|...||    :::|.|  :.|: 
plant   841 YFRGHQARCRLKELKTGITILQSFVRGEKMRKEYTELLQRHRASAAIQ----SHVKRRIASQQY- 900

  Fly   919 RLYTKVKPLLEVTKQEEKLVQKEDELKQVREKLDTL----AKNTQEYERKYQQALVEKTTLAE-- 977
                      :.|.....::|.....:.||.....:    :..|:..|.  .:.||:.:.|::  
plant   901 ----------KATVDASAVIQSAIRGELVRRCAGDIGWLSSGGTKRNES--DEVLVKASYLSDLQ 953

  Fly   978 --QLQAEIELCAEAEESRSRLMARKQELEDMMQELETRIEEEEERVLALGGEKKKLELNIQDLEE 1040
              .|:.|..| .|.||....|..|.|:.::...|.||:::..||   ....:.|.|:.::...::
plant   954 RRVLRTEAAL-REKEEENDILRQRVQQYDNRWSEYETKMKSMEE---IWQKQMKSLQSSLSIAKK 1014

  Fly  1041 QLEEEEAARQK----LQLEKVQLDAKIKKYEEDLALTDDQNQKLLKEKKLLEERANDLSQTLAEE 1101
            .||.|::||..    ...:...||:....|:    :...:::.:.....::...|.:..|.....
plant  1015 SLEVEDSARNSDASVNASDATDLDSGGSHYQ----MGHGRSRSVGVGLSVISRLAEEFGQRAQVF 1075

  Fly  1102 EEKAKHLAKLKAKHEATISELEERLHKDQQQRQESDRSKRKIETEVADLKEQLNERRVQVDEMQA 1166
            .:..|.|.::|:      .::|..|:.|::.|    |.|:..||...|...:|.|.::.:.::.:
plant  1076 GDDRKFLMEVKS------GQVEANLNPDRELR----RLKQMFETWKKDYGGRLRETKLILSKLGS 1130

  Fly  1167 Q 1167
            :
plant  1131 E 1131

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zipNP_523860.2 Myosin_N 80..117 CDD:280832 9/38 (24%)
Myosin_head 133..854 CDD:278492 283/730 (39%)
MYSc_Myh2_insects_mollusks 145..854 CDD:276876 277/718 (39%)
Myosin_tail_1 931..2011 CDD:279860 49/249 (20%)
Prefoldin 1431..1515 CDD:298833
FAM76 <1847..1926 CDD:292665
VIIIANP_175453.2 MYSc_Myo8 171..817 CDD:276834 277/718 (39%)
MAD 848..>1029 CDD:368498 46/201 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 565 1.000 Inparanoid score I246
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000014
OrthoInspector 1 1.000 - - mtm946
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X58
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.960

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