DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment zip and XIC

DIOPT Version :9

Sequence 1:NP_523860.2 Gene:zip / 38001 FlyBaseID:FBgn0265434 Length:2056 Species:Drosophila melanogaster
Sequence 2:NP_172349.2 Gene:XIC / 837394 AraportID:AT1G08730 Length:1538 Species:Arabidopsis thaliana


Alignment Length:1442 Identity:429/1442 - (29%)
Similarity:703/1442 - (48%) Gaps:252/1442 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 VWVPHENQGFVAASIKREHGDEVEVELAETGKRVMILRDDIQKMNPPKFDK----VEDMAELTCL 142
            ||.......::...:::.:|.||.:: |.|||:|..   .:.|:.|...:.    |:||.:|:.|
plant    21 VWFEDPEVAWIDGEVEKINGQEVVIQ-ATTGKKVTA---K
LSKIYPKDVEAPAGGVDDMTKLSYL 81

  Fly   143 NEASVLHNIKDRYYSGLIYTYSGLFCVVVNPYKKLP-IYTEKIMERYKGIKRHEVPPHVFAITDS 206
            :|..||.|:|.||....||||:|...:.:||:::|| ||...:|::|||....|:.|||||:.|.
plant    82 HEPGVLQNLKIRYELNEIYTYTGNILIAINPFQRLPHIYDAHMMQQYKGAPLGELSPHVFAVADV 146

  Fly   207 AYRNMLGDREDQSILCTGESGAGKTENTKKVIQFLAYVAASKPKGSGAVPHPAVLINFSVNTNKY 271
            |||.|:.:.:..|||.:|||||||||.||.::::|||:      |..||                
plant   147 AYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYL------GGRAV---------------- 189

  Fly   272 IKVKIMAQNQNQTIEVVNGLKMVEVNSNCQEGELEQQLLQANPILEAFGNAKTVKNDNSSRFGKF 336
                    .:.:|:                    |||:|::||:||||||||||:|:||||||||
plant   190 --------TEGRTV--------------------EQQVLESNPVLEAFGNAKTVRNNNSSRFGKF 226

  Fly   337 IRINFDASGFISGANIETYLLEKSRAIRQAKDERTFHIFYQLLAGATPEQREKFILDDVKSYAFL 401
            :.|.||..|.||||.|.|||||:||..:.:..||.:|.|| ||..|..|:.||:.|...|::.:|
plant   227 VEIQFDKQGRISGAAIRTYLLERSRVCQISDPERNYHCFY-LLCAAPQEEIEKYKLGHPKTFHYL 290

  Fly   402 SNGS-LPVPGVDDYAEFQATVKSMNIMGMTSEDFNSIFRIVSAVLLFGSMKFRQERNNDQATLPD 465
            :... ..:.|:.|..::.||.::|:|:|::.::..:|||:|:|:|..|::.|.:.:..|.:...|
plant   291 NQSKCFELVGISDAHDYLATRRAMDIVGISEKEQEAIFRVVAAILHIGNIDFTKGKEVDSSVPKD 355

  Fly   466 -------NTVAQKI-AHLLGLSVTDMTRAFLTPRIKVGRDFVTKAQTKEQVEFAVEAIAKACYER 522
                   .|.|:.: ..|..|......|..:||     .:.:.::...:....:.:.:||..|.|
plant   356 EKSKFHLKTAAELLMCDLKALEDALCKRVMITP-----EEVIKRSLDPQSAVTSRDGLAKTVYSR 415

  Fly   523 MFKWLVNRINRSL--DRTKRQGASFIGILDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFIL 585
            :|.|||::||:|:  |...|   |.||:||:.|||.|:.|||||.|||:|||||||.||..:|.:
plant   416 LFDWLVDKINKSIGQDANSR---SLIGVLDIYGFESFKTNSFEQFCINFTNEKLQQHFNQHVFKM 477

  Fly   586 EQEEYQREGIEWKFIDFGLDLQPTIDLID-KPGGIMALLDEECWFPKATDKTFVDKLVSAHSMHP 649
            |||||.:|.|:|.:|:| :|.|..:|||: |||||:|||||.|.|||:|.:||.:||......|.
plant   478 EQEEYTKEAIDWSYIEF-VDNQDVLDLIEKKPGGIVALLDEACMFPKSTHETFANKLYQTFKTHK 541

  Fly   650 KFMKTDFRGVADFAIVHYAGRVDYSAAKWLMKNMDPLNENIVSLLQGSQDPFVVNIWKDAEIVGM 714
            :|:|... ...|||:.||||.|.|.:..:|.||.|.:......||..|:.|||         ||:
plant   542 RFIKPKL-SRTDFAVAHYAGEVLYQSELFLDKNKDYVIPEHQDLLGASKCPFV---------VGL 596

  Fly   715 AQQALTDTQFGARTRKGMFRTVSHLYKEQLAKLMDTLRNTNPNFVRCIIPNHEKRAGKIDAPLVL 779
            ......:|     ::...|.::...:|.||.:||:||..|.|:::||:.||:..:....:...::
plant   597 FPPLPEET-----SKSSKFSSIGSRFKLQLQQLMETLNCTEPHYIRCVKPNNLLKPAIFENVNIM 656

  Fly   780 DQLRCNGVLEGIRICRQGFPNRIPFQEFRQRYELLTPNVIPKGFMDGKKACEKMIQALELDSNLY 844
            .||||.||||.|||...|:|.|.||.||..|:.||:|..: :|..|.|.||:|::..:.|..  |
plant   657 QQLRCGGVLEAIRISCAGYPTRKPFFEFINRFGLLSPAAL-EGNFDEKVACQKILDNMGLKG--Y 718

  Fly   845 RVGQSKIFFRAGVLAHLE-----------------------EERDFKISDLIVNFQAFCRGFLAR 886
            ::|::|:|.|||.:|.|:                       ::|...:....::.||.|||.|:.
plant   719 QIGKTKVFLRAGQMAELDARRAEVLSSAAKKIQRRIRTHQAQKRFIVLRKATISLQAICRGRLSC 783

  Fly   887 RNYQKRLQQLNAIRIIQRNCAAYLKLRNWQWWRLYTKVKPLLEVTKQEEKLVQKEDELKQVREKL 951
            ::|....::..|:: ||:|...:...::::  :|:  |..|:..|.......:     ||.|.:.
plant   784 KHYDNLRREAAAVK-IQKNGRRHYSRKSYK--KLH--VASLVVQTGLRAMAAR-----KQFRFRK 838

  Fly   952 DTLAKNTQEYERKYQQALVEKTTLAEQLQAEIELCAEAEESRSRLMARKQELEDM-MQELETRIE 1015
            .|.|....:.:.:..:|:    :..::|:..:.|    .::|.|....|:||..: |...||.  
plant   839 QTKAATIVQAQWRCHRAI----SYYKKLKNGVVL----SQTRWRGRLAKRELRKLKMAARETG-- 893

  Fly  1016 EEEERVLALGGEKKKLELNIQDLEEQLEEEEAARQKLQLEKVQLDAKIK-KYEEDLALTDDQNQK 1079
                   ||...|..||..:::|..:::.|:.:|..|:..|.|...|:| .:||.....|:.|..
plant   894 -------ALKEAKDMLEKKVEELTYRVQLEKRSRGDLEEAKTQEILKLKSSFEEMRKKVDETNAL 951

  Fly  1080 LLKEKKLLEERANDLSQTLAEEEEKAKHLAKLKAKHEATISELEERLHKDQQQRQESDRSKRKIE 1144
            ||||::..::.|.:....:.|.:...:...|:    |....|||......:.::|.:|.:.||.|
plant   952 LLKEREAAKKAAEEAPPVIKETQILVEDTKKI----ELMTEELESVKVTLENEKQRADDAVRKFE 1012

  Fly  1145 TEVADLKEQLNERRVQVDEMQAQLAKREEELTQTLLRIDEESATKATAQKAQRELESQLAEIQED 1209
                :.:|.|.:::.:::|.:    |:.::|.::|.|::|:.:...:..|..|:....:|     
plant  1013 ----EAQESLEDKKKKLEETE----KKGQQLQESLTRMEEKCSNLESENKVLRQQAVSMA----- 1064

  Fly  1210 LEAEKAARAKAEKVRRDLSEE----LEALKNELLDSLDTT---------AAQQELRSKREQELAT 1261
              ..|....::..:.:..||.    ::|..|..|.|....         ..|:.|..|:::....
plant  1065 --PNKFLSGRSRSILQRGSESGHLAVDARSNLDLHSHSINHRDPSEVEDKPQKSLNEKQQENQDL 1127

  Fly  1262 LKKSLEEETVNHEG------VLADMRHK------------------------HSQELNSINDQLE 1296
            |.:|:    |.|.|      :.|.:.:|                        |:.|....|:.|.
plant  1128 LIRSI----VQHLGFQGNRPITACIIYKCLLQWRSFEVERTSVFDRIIQTIGHAIETQDNNNTLA 1188

  Fly  1297 N-LRKAKTVLEKAKGTLEAEN-ADLATELRSVNSS----RQENDRRR------------------ 1337
            . |....|:|...:.||:|.. |.:|.:.|..:|:    |.....|.                  
plant  1189 YWLSNTSTLLLLLQRTLKASGAAGMAPQRRRSSSATLFGRMSQSFRGAPPGVNLAMINGAAGGGA 1253

  Fly  1338 ---KQAESQIAELQVK---LAEIERARSELQEKCTKLQQEAENITNQLEEAELKASAA-VKSASN 1395
               :|.|::...|..|   .|.:|:....:::   .|::|...:.....:|...:.|: ||.||.
plant  1254 DTFRQVEAKYPALLFKQQLTAYVEKIYGMIRD---NLKKEISPLLGLCIQAPRTSRASLVKGASR 1315

  Fly  1396 MESQLTEAQQLL 1407
            .... |.|||.|
plant  1316 SVGN-TAAQQAL 1326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zipNP_523860.2 Myosin_N 80..117 CDD:280832 10/34 (29%)
Myosin_head 133..854 CDD:278492 284/733 (39%)
MYSc_Myh2_insects_mollusks 145..854 CDD:276876 278/721 (39%)
Myosin_tail_1 931..2011 CDD:279860 113/553 (20%)
Prefoldin 1431..1515 CDD:298833
FAM76 <1847..1926 CDD:292665
XICNP_172349.2 Myosin_N 19..56 CDD:280832 10/38 (26%)
MYSc 71..739 CDD:214580 289/745 (39%)
MYSc_Myo11 84..728 CDD:276835 278/721 (39%)
Rabaptin 726..>1055 CDD:281520 79/367 (22%)
MyosinXI_CBD 1119..1504 CDD:271259 43/216 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000014
OrthoInspector 1 1.000 - - mtm946
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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