DRSC/TRiP Functional Genomics Resources

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Protein Alignment zip and VIIIB

DIOPT Version :9

Sequence 1:NP_523860.2 Gene:zip / 38001 FlyBaseID:FBgn0265434 Length:2056 Species:Drosophila melanogaster
Sequence 2:NP_001328307.1 Gene:VIIIB / 828845 AraportID:AT4G27370 Length:1136 Species:Arabidopsis thaliana


Alignment Length:1212 Identity:373/1212 - (30%)
Similarity:580/1212 - (47%) Gaps:199/1212 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LALKSKSALHPKSEYPVSNIHYPKAANYRQTRNYLEI----AAKMSEEVDRNDPELKYLSVERNQ 66
            ::|:||:......::....|  .::|...:|.|  |:    .|:||...:.:|||.         
plant    50 ISLESKTIEKEDKDWSTEQI--TQSAEKEKTGN--EVVKISTAQMSRAKNSHDPEW--------- 101

  Fly    67 FNDPATQAEW--TQKRLVW--VPHENQGFVAASIKREHGDEVEVELAETGKRVMILRDDIQKMNP 127
                ...||:  .:|..||  |....|..:.........|:|.|.|:.....|.:..::|...||
plant   102 ----INSAEYFVREKLCVWCRVAANGQWHLGKIHSTSSSDDVCVMLSANDDVVKVAMEEIFPANP 162

  Fly   128 PKFDKVEDMAELTCLNEASVLHNIKDRYYSGLIYTYSGLFCVVVNPYKKLPIYTEKIMERYKGIK 192
            ...:.|||:.:|:.|||.|:|:|::.||...|||:.:|...:.|||:|.:.||.|:.:..|:  |
plant   163 EILEGVEDLTQLSYLNEPSLLYNLRVRYSQDLIYSKAGPVLIAVNPFKNVQIYGEEFLSAYQ--K 225

  Fly   193 RHEVPPHVFAITDSAYRNMLGDREDQSILCTGESGAGKTENTKKVIQFLAYVAASKPKGSGAVPH 257
            .....|||:|:.|:||.:|:.:.::|||:.:|||||||||..|..:|:|      :..|.|    
plant   226 NALDAPHVYAVADAAYDDMMREEKNQSIIISGESGAGKTETAKYAMQYL------EALGGG---- 280

  Fly   258 PAVLINFSVNTNKYIKVKIMAQNQNQTIEVVNGLKMVEVNSNCQEGELEQQLLQANPILEAFGNA 322
                 :|.|                                       |.::|:.|.||||||||
plant   281 -----SFGV---------------------------------------ENEILKTNCILEAFGNA 301

  Fly   323 KTVKNDNSSRFGKFIRINFDASGFISGANIETYLLEKSRAIRQAKDERTFHIFYQLLAGATPEQR 387
            ||.:|||||||||.:.|:|.|.|.|.||.:||:.|::||..:....||.:||||||.|||:|..:
plant   302 KTSRNDNSSRFGKLMEIHFSAKGKICGAKLETFSLDQSRVAQLCNGERCYHIFYQLCAGASPILK 366

  Fly   388 EKFILDDVKSYAFLSNGS-LPVPGVDDYAEFQATVKSMNIMGMTSEDFNSIFRIVSAVLLFGSMK 451
            |:..:.....|.:|:..: |.:...||..:|...:::.||:.:..|.....|.:::|||..|::.
plant   367 ERLKIKAASEYNYLNQSNCLTIDRTDDAQKFHKLMEAFNIVQIPQEYQERTFALLAAVLWLGNVS 431

  Fly   452 FRQERNNDQATLPDNTVAQKIAHLLGLSVTDMTRAFLTPRIKVGRDFVTKAQTKEQVEFAVEAIA 516
            |....|.:...:..:.....:|.|:|.:...:.....|.:::.|||.:.|..|..|.....:::|
plant   432 FEVIDNENHVEVVADEAVTNVAMLMGCNSKKLMVVLSTCKLQAGRDCIAKRLTLRQATDMRDSLA 496

  Fly   517 KACYERMFKWLVNRINRSLD-RTKRQGASFIGILDMAGFEIFELNSFEQLCINYTNEKLQQLFNH 580
            |..|..:|.|||.:||.||: ...|.|.| |.|||:.|||.|:.|||||.||||.||:|||.||.
plant   497 KIIYASLFNWLVEQINISLEVGNSRTGRS-ISILDIYGFESFKDNSFEQFCINYANERLQQHFNR 560

  Fly   581 TMFILEQEEYQREGIEWKFIDFGLDLQPTIDLID-KPGGIMALLDEECWFPKATDKTFVDKLVSA 644
            .:|.||||||:.:||:|..::| :|.|..::||: ||.|:::||:||..||||||.||.:||...
plant   561 HLFKLEQEEYEGDGIDWTKVEF-IDNQECLNLIEKKPIGLVSLLNEESNFPKATDTTFANKLKQH 624

  Fly   645 HSMHPKFMKTDFRGVADFAIVHYAGRVDYSAAKWLMKNMDPLNENIVSLLQGSQDPFVVNIWKDA 709
            .:.:..|.....||   |.|.||||.|.|:...:|.||.|||:.:::.||...:.. ::|::.  
plant   625 LNANSCFKGERGRG---FRIKHYAGEVLYNTNGFLEKNRDPLHVDLIQLLSLCKCQ-LLNLFS-- 683

  Fly   710 EIVGMAQQALTDTQFGARTRKGMFRTVSHLYKEQLAKLMDTLRNTNPNFVRCIIPNHEKRAGKID 774
              ..|....|....|.    ..|.::|...:|.||.|||:.|.:|.|:|:|||.||..:..|..:
plant   684 --TKMHHDFLKPATFS----DSMNQSVIAKFKGQLFKLMNKLEDTTPHFIRCIKPNSNQLPGLYE 742

  Fly   775 APLVLDQLRCNGVLEGIRICRQGFPNRIPFQEFRQRYE-LLTPNVIPKGFMDGKKACEKMIQALE 838
            ...||.||||.||||.:||.|.|:|.|:..||...||. ||....|.:..:...||   :::...
plant   743 ENHVLQQLRCCGVLEIVRISRSGYPTRLTHQELAVRYGCLLLDTRISQDPLSTSKA---ILKQCN 804

  Fly   839 LDSNLYRVGQSKIFFRAGVLAHLEEERDFKISDLI----------------------VNFQAFCR 881
            |...:|:||.:||:.|.||::.|||.:.:.:..::                      |..|::.|
plant   805 LPPEMYQVGYTKIYLRTGVISVLEERKKYVLRGILGLQKQFRGYQTREYFHNMRNAAVILQSYIR 869

  Fly   882 GFLARRNY----------QKRLQQLNAIRIIQRNCAAYLKLRNWQWWRLYTKVKPLLEVTKQEEK 936
            |..|||||          ....::|:|...:|     |: :|.|       ..:.||..|:|:.|
plant   870 GENARRNYIVVGESAIVSTAITKELDAAIHLQ-----YM-VRKW-------LARKLLNSTQQKNK 921

  Fly   937 LVQKEDELKQVREKLDTLAKNTQEYERKYQQALVEKTTLAEQLQAEIELCAEAEESRSRLMARKQ 1001
               ..:|.|:.|.|   ..|...|          :|..|:||.  |::.|..|            
plant   922 ---PRNEKKKTRRK---STKRVSE----------DKELLSEQF--EVQPCVLA------------ 956

  Fly  1002 ELEDMMQELETRIEEEEERVLALGGEKKKLELNIQDLEEQLEEEEAARQK-LQLEKVQLDAKIKK 1065
            :|:..:.::|..|.::|:...||..|.::.|....:.|.:::..|...|| :...::.|.|..|.
plant   957 DLQSRVLKVEAAIMQKEDENTALQEELQRFEERWLENETRMKSMEDTWQKHMSSMQMSLAAACKV 1021

  Fly  1066 YEEDLAL---TDDQNQKLL----KEKKLLEERANDLSQTLAEE----EEKAKHLAKLKAKHEATI 1119
            ...|...   ||.::....    ||.|......|:||....:.    .|..|.|.::|:      
plant  1022 LAPDKTASHGTDSEDTMSFGTPTKELKGSLSDVNNLSTEFDQRSVIIHEDPKSLVEVKS------ 1080

  Fly  1120 SELEERLHKDQQQRQESDRSKRKIETEVADLKEQLNERRVQV 1161
                :.:...:|..:|..|.|.:.|....|.|.:|.|.:.:|
plant  1081 ----DSISNRKQHAEELRRLKSRFEKWKKDYKTRLRETKARV 1118

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zipNP_523860.2 Myosin_N 80..117 CDD:280832 9/38 (24%)
Myosin_head 133..854 CDD:278492 267/724 (37%)
MYSc_Myh2_insects_mollusks 145..854 CDD:276876 260/712 (37%)
Myosin_tail_1 931..2011 CDD:279860 54/243 (22%)
Prefoldin 1431..1515 CDD:298833
FAM76 <1847..1926 CDD:292665
VIIIBNP_001328307.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 565 1.000 Inparanoid score I246
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000014
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X58
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.960

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